BLASTX nr result

ID: Coptis24_contig00029876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029876
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247...   245   1e-62
emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]   245   1e-62
emb|CBI17905.3| unnamed protein product [Vitis vinifera]              230   3e-58
ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|2...   221   3e-55
ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|2...   216   9e-54

>ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
          Length = 1045

 Score =  245 bits (626), Expect = 1e-62
 Identities = 152/346 (43%), Positives = 215/346 (62%), Gaps = 16/346 (4%)
 Frame = -3

Query: 992  GDDWVGKRRTAQVIAGSIYGSTANHVVHMNMRR-GNQITPWSEILLTALRKQERSVVFIE 816
            G+D +GKRR A  IA S++GS A+ V  MNMR+  N +TP SEIL  ALR  ++ VV +E
Sbjct: 700  GNDSIGKRRLAHAIAESVFGS-ADLVFRMNMRKLDNGVTPCSEILTEALRAHQKLVVMVE 758

Query: 815  EIDYADSDFIDFLHDAYNCN-LDEQIMRKTSFAQAIFIVAKGDSTRCEGRNKLCDVNVVQ 639
            ++D+A+  F+ FL D        +   R+ SF QAIFI+  GDS+  + R K    +V+ 
Sbjct: 759  DVDFAEPQFMKFLADGCETGEFRDSSKREGSFGQAIFILTTGDSSSYQER-KGNKSSVIH 817

Query: 638  MKLLVKESVDA-EVLEYDHKRKAGWDTSNTVKNQRTCDKGDTSTKKV---------FSRQ 489
            MKL +  ++        DHKRKA WD SN  K+ RT ++  +    V         F+RQ
Sbjct: 818  MKLQINLTIPTLGTPNMDHKRKAEWDLSNRTKSPRTDEEEGSCLISVEPGNSKILEFTRQ 877

Query: 488  SSSNTLDLNILAEEE---YNEDEEFKSVPSDLTEETATSSKSLNGFLCLIEHRFVFNQKS 318
             S NTLDLNI A+E+    ++  E   + SDLT ETAT  ++ +GFL  IE+RF F +K+
Sbjct: 878  LSFNTLDLNIRADEDDESKDKPRELSPISSDLTRETATDIQNPHGFLESIENRFTFKRKA 937

Query: 317  TQLSQMTEDFMSKLKRSFKEVFGSESKGCFSVDQLVLEEIVNGWGFFLASFLENWLKDIF 138
             Q  +M E F+SK+K SF+  + SE+   FSV+Q +LEE++ G   FL S  E WLK++F
Sbjct: 938  DQDREMREAFLSKIKGSFEVGYDSENTVSFSVEQKLLEEVLAGCDSFLNSLFEKWLKEVF 997

Query: 137  QTSLQMVKRGGKEG-SVRLSLGGKEDSGLDTGYMGTNLPRTIEVAF 3
            QTS++ VK GGKEG  VRL L GK + GL+ G+MG++LP+ I+V+F
Sbjct: 998  QTSVKTVKIGGKEGMEVRLRLVGKGEKGLEDGFMGSSLPKKIQVSF 1043


>emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
          Length = 1032

 Score =  245 bits (626), Expect = 1e-62
 Identities = 152/346 (43%), Positives = 215/346 (62%), Gaps = 16/346 (4%)
 Frame = -3

Query: 992  GDDWVGKRRTAQVIAGSIYGSTANHVVHMNMRR-GNQITPWSEILLTALRKQERSVVFIE 816
            G+D +GKRR A  IA S++GS A+ V  MNMR+  N +TP SEIL  ALR  ++ VV +E
Sbjct: 687  GNDSIGKRRLAHAIAESVFGS-ADLVFRMNMRKLDNGVTPCSEILTEALRAHQKLVVMVE 745

Query: 815  EIDYADSDFIDFLHDAYNCN-LDEQIMRKTSFAQAIFIVAKGDSTRCEGRNKLCDVNVVQ 639
            ++D+A+  F+ FL D        +   R+ SF QAIFI+  GDS+  + R K    +V+ 
Sbjct: 746  DVDFAEPQFMKFLADGCETGEFRDSSKREGSFGQAIFILTTGDSSSYQER-KGNKSSVIH 804

Query: 638  MKLLVKESVDA-EVLEYDHKRKAGWDTSNTVKNQRTCDKGDTSTKKV---------FSRQ 489
            MKL +  ++        DHKRKA WD SN  K+ RT ++  +    V         F+RQ
Sbjct: 805  MKLQINLTIPTLGTPNMDHKRKAEWDLSNRTKSPRTDEEEGSCLISVEPGNSKILEFTRQ 864

Query: 488  SSSNTLDLNILAEEE---YNEDEEFKSVPSDLTEETATSSKSLNGFLCLIEHRFVFNQKS 318
             S NTLDLNI A+E+    ++  E   + SDLT ETAT  ++ +GFL  IE+RF F +K+
Sbjct: 865  LSFNTLDLNIRADEDDESKDKPRELSPISSDLTRETATDIQNPHGFLESIENRFTFKRKA 924

Query: 317  TQLSQMTEDFMSKLKRSFKEVFGSESKGCFSVDQLVLEEIVNGWGFFLASFLENWLKDIF 138
             Q  +M E F+SK+K SF+  + SE+   FSV+Q +LEE++ G   FL S  E WLK++F
Sbjct: 925  DQDREMREAFLSKIKGSFEVGYDSENTVSFSVEQKLLEEVLAGCDSFLNSLFEKWLKEVF 984

Query: 137  QTSLQMVKRGGKEG-SVRLSLGGKEDSGLDTGYMGTNLPRTIEVAF 3
            QTS++ VK GGKEG  VRL L GK + GL+ G+MG++LP+ I+V+F
Sbjct: 985  QTSVKTVKIGGKEGMEVRLCLVGKGEKGLEDGFMGSSLPKKIQVSF 1030


>emb|CBI17905.3| unnamed protein product [Vitis vinifera]
          Length = 974

 Score =  230 bits (587), Expect = 3e-58
 Identities = 146/337 (43%), Positives = 207/337 (61%), Gaps = 7/337 (2%)
 Frame = -3

Query: 992  GDDWVGKRRTAQVIAGSIYGSTANHVVHMNMRR-GNQITPWSEILLTALRKQERSVVFIE 816
            G+D +GKRR A  IA S++GS A+ V  MNMR+  N +TP SEIL  ALR  ++ VV +E
Sbjct: 647  GNDSIGKRRLAHAIAESVFGS-ADLVFRMNMRKLDNGVTPCSEILTEALRAHQKLVVMVE 705

Query: 815  EIDYADSDFIDFLHDAYNCN-LDEQIMRKTSFAQAIFIVAKGDSTRCEGRNKLCDVNVVQ 639
            ++D+A+  F+ FL D        +   R+ SF QAIFI+  GDS+  + R K    +V+ 
Sbjct: 706  DVDFAEPQFMKFLADGCETGEFRDSSKREGSFGQAIFILTTGDSSSYQER-KGNKSSVIH 764

Query: 638  MKLLVKESVDA-EVLEYDHKRKAGWDTSNTVKNQRTCDKGDTSTKKVFSRQSSSNTLDLN 462
            MKL +  ++        DHKRKA    S    N +  +         F+RQ S NTLDLN
Sbjct: 765  MKLQINLTIPTLGTPNMDHKRKADCLISVEPGNSKILE---------FTRQLSFNTLDLN 815

Query: 461  ILAEEE---YNEDEEFKSVPSDLTEETATSSKSLNGFLCLIEHRFVFNQKSTQLSQMTED 291
            I A+E+    ++  E   + SDLT ETAT  ++ +GFL  IE+RF F +K+ Q  +M E 
Sbjct: 816  IRADEDDESKDKPRELSPISSDLTRETATDIQNPHGFLESIENRFTFKRKADQDREMREA 875

Query: 290  FMSKLKRSFKEVFGSESKGCFSVDQLVLEEIVNGWGFFLASFLENWLKDIFQTSLQMVKR 111
            F+SK+K SF+  + SE+   FSV+Q +LEE++ G   FL S  E WLK++FQTS++ VK 
Sbjct: 876  FLSKIKGSFEVGYDSENTVSFSVEQKLLEEVLAGCDSFLNSLFEKWLKEVFQTSVKTVKI 935

Query: 110  GGKEG-SVRLSLGGKEDSGLDTGYMGTNLPRTIEVAF 3
            GGKEG  VRL L GK + GL+ G+MG++LP+ I+V+F
Sbjct: 936  GGKEGMEVRLRLVGKGEKGLEDGFMGSSLPKKIQVSF 972


>ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|222866690|gb|EEF03821.1|
            predicted protein [Populus trichocarpa]
          Length = 899

 Score =  221 bits (562), Expect = 3e-55
 Identities = 143/338 (42%), Positives = 203/338 (60%), Gaps = 9/338 (2%)
 Frame = -3

Query: 992  GDDWVGKRRTAQVIAGSIYGSTANHVVHMNMR-RGNQITPWSEILLTALRKQERSVVFIE 816
            G+D +GKRR A  IA S+ GS A+ ++H+NMR R N++T +SE+L  ALR QE+ VVF+E
Sbjct: 579  GNDTLGKRRLALAIAESVLGS-ADLLLHLNMRKRDNEVTSYSEMLARALRNQEKLVVFVE 637

Query: 815  EIDYADSDFIDFLHDAYNCNL--DEQIMRKTSFAQAIFIVAKGDSTRCEGRNKLCDVNVV 642
            ++D A++ F+ FL D +      +    R+ + +Q IFI+ +GDS   E R    D +V+
Sbjct: 638  DVDLAETRFLKFLADGFESGKFGESSNRREGNASQVIFILTRGDSIIYEDRKM--DDSVI 695

Query: 641  QMKLLVKESVDAEVLEYDHKRKAGWDTSNTVKNQRTCDKGDTSTKKVFSRQSSSNTLDLN 462
            QM L  K S  ++    D K  A W               + + KK FSRQSS NTLDLN
Sbjct: 696  QMTL--KISGKSKSPRVDEKENASWFPDE-----------NGNKKKDFSRQSSFNTLDLN 742

Query: 461  ILAEEEYNEDE----EFKSVPSDLTEETATSSKSLNGFLCLIEHRFVFNQKSTQLSQMTE 294
            + A+E+ +E E    EF  + SDLT ET++   S  G L +I++RFVF++   Q  +MTE
Sbjct: 743  LKADED-DESEGKPGEFSPISSDLTRETSSDQLSPKGLLDMIKNRFVFDRNQAQDIEMTE 801

Query: 293  DFMSKLKRSFKEVFGSESKGCFSVDQLVLEEIVNGWGFFLASFLENWLKDIFQTSLQMVK 114
               SK+KR+  EVFG ++   FS+++ VL E++ G G F+ S  E WLK IFQTSL+ VK
Sbjct: 802  VLSSKIKRNVNEVFGDQNGVYFSIEERVLGEVLEGSGSFVNSQFEKWLKGIFQTSLKTVK 861

Query: 113  RGGKEG--SVRLSLGGKEDSGLDTGYMGTNLPRTIEVA 6
             GGKE    VRL  G   D   + G+MGT LP+ I+V+
Sbjct: 862  LGGKEEGIGVRLCFGFTSDRVFEDGFMGTCLPKKIQVS 899


>ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|222854981|gb|EEE92528.1|
            predicted protein [Populus trichocarpa]
          Length = 896

 Score =  216 bits (549), Expect = 9e-54
 Identities = 139/338 (41%), Positives = 199/338 (58%), Gaps = 9/338 (2%)
 Frame = -3

Query: 992  GDDWVGKRRTAQVIAGSIYGSTANHVVHMNMR-RGNQITPWSEILLTALRKQERSVVFIE 816
            G+D +GKRR A  I+ S+ GS A+ ++H+NMR R N++T +SE+L   LR QE+  VF+E
Sbjct: 576  GNDTLGKRRLALAISESVLGS-ADLLLHLNMRKRDNEVTSYSEMLARTLRNQEKLAVFVE 634

Query: 815  EIDYADSDFIDFLHDAYNCNL--DEQIMRKTSFAQAIFIVAKGDSTRCEGRNKLCDVNVV 642
            ++D AD  F+ FL D +      +    R+ + +Q IFI+ +GDST  E R    D +V+
Sbjct: 635  DVDLADIQFLKFLADGFETERFGESSNKREGNGSQVIFILTRGDSTVYEDRKM--DDSVI 692

Query: 641  QMKLLVKESVDAEVLEYDHKRKAGWDTSNTVKNQRTCDKGDTSTKKVFSRQSSSNTLDLN 462
            QM L +    ++     D K  A W               + + KK FSRQSS NTLDLN
Sbjct: 693  QMTLKISGKSNSP--RVDEKENAYWFPDE-----------NGNKKKDFSRQSSFNTLDLN 739

Query: 461  ILAEEEYNEDE----EFKSVPSDLTEETATSSKSLNGFLCLIEHRFVFNQKSTQLSQMTE 294
            + A+E+ +E E    EF  + SDLT ET++   S  G L +I++RFVF++   Q  +M  
Sbjct: 740  LKADED-DESEGKPGEFSPISSDLTRETSSDQLSPKGLLDMIKNRFVFDRNQAQDIEMKG 798

Query: 293  DFMSKLKRSFKEVFGSESKGCFSVDQLVLEEIVNGWGFFLASFLENWLKDIFQTSLQMVK 114
               SK+KR+  EVFG ++   FS+++ VL E++ G G F+ S  E WLKDIFQTSL+ VK
Sbjct: 799  VLSSKIKRNVNEVFGDQNGVYFSIEERVLGEVLEGSGSFVNSQFEKWLKDIFQTSLKTVK 858

Query: 113  RGGKEG--SVRLSLGGKEDSGLDTGYMGTNLPRTIEVA 6
             GGKE    VRL  G   D   + G+MGT LP+ I+V+
Sbjct: 859  LGGKEEGIGVRLCFGFTSDRVFEDGFMGTCLPKKIQVS 896


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