BLASTX nr result

ID: Coptis24_contig00029869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029869
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274418.1| PREDICTED: probable beta-1,3-galactosyltrans...   140   8e-32
emb|CAN60055.1| hypothetical protein VITISV_039050 [Vitis vinifera]   140   8e-32
ref|XP_002316064.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002519288.1| conserved hypothetical protein [Ricinus comm...   124   8e-27
ref|XP_003550571.1| PREDICTED: probable beta-1,3-galactosyltrans...   123   2e-26

>ref|XP_002274418.1| PREDICTED: probable beta-1,3-galactosyltransferase 16 [Vitis
           vinifera] gi|297736772|emb|CBI25973.3| unnamed protein
           product [Vitis vinifera]
          Length = 637

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/131 (51%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   AFPETAQGIREASTAWKDLLLAIEKEQVSRLGSSSRHKIGVEDRNCPFFVNMLNRSLSKN 181
           A PETAQGI+EAS+AWKDL  AIE+++ S+  ++       E ++CPF V+  ++++  +
Sbjct: 108 ALPETAQGIKEASSAWKDLWSAIEEDKASKFNNTQSENGNPEAKDCPFSVSTFDKTVYSS 167

Query: 182 NLVLEFPCGLVVDSSITIIGVPGGQYENFQIELTASQLPGEPKPSKVLYYNVSFPGN--- 352
             +LEFPCGLV DSSIT+IG+P G+  +FQ+EL   QLPGE +P  +L+YNVS PG+   
Sbjct: 168 GCILEFPCGLVEDSSITVIGIPDGRNGSFQVELVGLQLPGEREPPILLHYNVSLPGDKLT 227

Query: 353 -YPVIVQNTWT 382
             PVIVQNTWT
Sbjct: 228 EEPVIVQNTWT 238


>emb|CAN60055.1| hypothetical protein VITISV_039050 [Vitis vinifera]
          Length = 1116

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/131 (51%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   AFPETAQGIREASTAWKDLLLAIEKEQVSRLGSSSRHKIGVEDRNCPFFVNMLNRSLSKN 181
           A PETAQGI+EAS+AWKDL  AIE+++ S+  ++       E ++CPF V+  ++++  +
Sbjct: 108 ALPETAQGIKEASSAWKDLWSAIEEDKASKFNNTQSENGNPEAKDCPFSVSTFDKTVYSS 167

Query: 182 NLVLEFPCGLVVDSSITIIGVPGGQYENFQIELTASQLPGEPKPSKVLYYNVSFPGN--- 352
             +LEFPCGLV DSSIT+IG+P G+  +FQ+EL   QLPGE +P  +L+YNVS PG+   
Sbjct: 168 GCILEFPCGLVEDSSITVIGIPDGRNGSFQVELVGLQLPGEREPPILLHYNVSLPGDKLT 227

Query: 353 -YPVIVQNTWT 382
             PVIVQNTWT
Sbjct: 228 EEPVIVQNTWT 238


>ref|XP_002316064.1| predicted protein [Populus trichocarpa] gi|222865104|gb|EEF02235.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/131 (47%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   AFPETAQGIREASTAWKDLLLAIEKEQVSRLGSSSRHKIGVEDRNCPFFVNMLNRSLSKN 181
           A PET QGIREAS AWKDLL  I++ + ++L + ++     ED+NCP+ V+ ++ + S  
Sbjct: 87  ALPETNQGIREASIAWKDLLSKIKENKAAQLSNINK----TEDKNCPYSVSTIDLTTSSG 142

Query: 182 NLVLEFPCGLVVDSSITIIGVPGGQYENFQIELTASQLPGEPKPSKVLYYNVSFPGN--- 352
             +L+ PCGL  DSSI+++G+P G   +FQI+L  SQLP E  P  +L YNVS PG+   
Sbjct: 143 ETILDIPCGLAEDSSISVLGIPDGHSRSFQIQLLGSQLPVESNPPIILQYNVSLPGDNMT 202

Query: 353 -YPVIVQNTWT 382
             P +VQNTWT
Sbjct: 203 EEPFVVQNTWT 213


>ref|XP_002519288.1| conserved hypothetical protein [Ricinus communis]
           gi|223541603|gb|EEF43152.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 661

 Score =  124 bits (311), Expect = 8e-27
 Identities = 67/131 (51%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   AFPETAQGIREASTAWKDLLLAIEKEQVSRLGSSSRHKIGVEDRNCPFFVNMLNRSLSKN 181
           A  ETAQGI+EAS AWKDLL  I++++V + G  ++      D NCP+ V+ ++++ S N
Sbjct: 134 ALAETAQGIKEASVAWKDLLSIIKEDEVVKSGIINKPG----DNNCPYSVSTVDKTTSSN 189

Query: 182 NLVLEFPCGLVVDSSITIIGVPGGQYENFQIELTASQLPGEPKPSKVLYYNVSFPGN--- 352
             VLE PCGLV DSSITI+G+P     +FQIEL  SQL GE  P  +L Y VS PG+   
Sbjct: 190 GTVLEVPCGLVEDSSITIVGIPDEHNGSFQIELHGSQLLGENNPPNILNYKVSVPGDNMT 249

Query: 353 -YPVIVQNTWT 382
             P IVQNTWT
Sbjct: 250 EEPFIVQNTWT 260


>ref|XP_003550571.1| PREDICTED: probable beta-1,3-galactosyltransferase 16-like [Glycine
           max]
          Length = 638

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   AFPETAQGIREASTAWKDLLLAIEKEQVSRLGSSSRHKIGVEDRNCPFFVNMLNRSLSKN 181
           A  ETAQG++EAS AWK+LL  +EK++ S++        G E++NCPF V    +++  +
Sbjct: 115 ALAETAQGVKEASVAWKELLSIVEKDKASKINKMD----GPENQNCPFSVTSPGKAVPDS 170

Query: 182 NLVLEFPCGLVVDSSITIIGVPGGQYENFQIELTASQLPGEPKPSKVLYYNVSFPG---- 349
            + L+ PCGLVVDSSIT+IG+P  +  +FQI+L   +  GEP P  +L+YNVS PG    
Sbjct: 171 GITLDLPCGLVVDSSITLIGIPNNR--SFQIDLAGLEQEGEPNPPIILHYNVSLPGENMT 228

Query: 350 NYPVIVQNTWT 382
             P IVQNTWT
Sbjct: 229 EEPYIVQNTWT 239


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