BLASTX nr result
ID: Coptis24_contig00029858
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029858 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis... 145 3e-33 ref|XP_002881686.1| hypothetical protein ARALYDRAFT_483034 [Arab... 144 1e-32 gb|AFK49171.1| unknown [Lotus japonicus] 139 2e-31 ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycin... 136 2e-30 gb|AFK45880.1| unknown [Medicago truncatula] 135 3e-30 >ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis thaliana] gi|20140011|sp|P58684.1|SPCS2_ARATH RecName: Full=Probable signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit gi|17528956|gb|AAL38688.1| unknown protein [Arabidopsis thaliana] gi|20465965|gb|AAM20168.1| unknown protein [Arabidopsis thaliana] gi|330254662|gb|AEC09756.1| signal peptidase complex subunit 2 [Arabidopsis thaliana] Length = 192 Score = 145 bits (366), Expect = 3e-33 Identities = 70/97 (72%), Positives = 88/97 (90%) Frame = -3 Query: 291 TTSKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQF 112 +T+KN K+ANL D +SIKH+LDESVS+I+ SRG+KEDV++SN++L+LGTIII+VALVAQF Sbjct: 8 STNKNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQF 67 Query: 111 YPKKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNA 1 Y KKFPE+++FLI CI LYV+LN VLQLI YTKEKNA Sbjct: 68 YNKKFPENRDFLIGCIALYVVLNAVLQLILYTKEKNA 104 >ref|XP_002881686.1| hypothetical protein ARALYDRAFT_483034 [Arabidopsis lyrata subsp. lyrata] gi|297327525|gb|EFH57945.1| hypothetical protein ARALYDRAFT_483034 [Arabidopsis lyrata subsp. lyrata] Length = 192 Score = 144 bits (362), Expect = 1e-32 Identities = 69/97 (71%), Positives = 88/97 (90%) Frame = -3 Query: 291 TTSKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQF 112 +++KN K+ANL D +SIKH+LDESVS+I+ SRG+KEDV++SN++L+LGTIII+VALVAQF Sbjct: 8 SSNKNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQF 67 Query: 111 YPKKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNA 1 Y KKFPE+++FLI CI LYV+LN VLQLI YTKEKNA Sbjct: 68 YNKKFPENRDFLIGCIALYVVLNAVLQLILYTKEKNA 104 >gb|AFK49171.1| unknown [Lotus japonicus] Length = 184 Score = 139 bits (351), Expect = 2e-31 Identities = 67/95 (70%), Positives = 84/95 (88%) Frame = -3 Query: 285 SKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQFYP 106 SK+ K+ANL D NSIKH+LDESVSEI+ SRG+ EDV++SNVRLL+GT+II++AL AQFY Sbjct: 3 SKSLKKANLLDHNSIKHILDESVSEIVTSRGYVEDVRLSNVRLLVGTVIIVIALFAQFYK 62 Query: 105 KKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNA 1 KKFPE+++FL++CI LYV+ N VLQLI YTKEKNA Sbjct: 63 KKFPENRDFLLACIALYVIFNGVLQLIIYTKEKNA 97 >ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycine max] gi|255625849|gb|ACU13269.1| unknown [Glycine max] Length = 184 Score = 136 bits (342), Expect = 2e-30 Identities = 66/95 (69%), Positives = 82/95 (86%) Frame = -3 Query: 285 SKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQFYP 106 SK K+ANL D +SIKH+LDESVSE++ SRGF EDV++SNVRLL+G III++AL AQFY Sbjct: 3 SKAPKKANLLDHHSIKHILDESVSEVVTSRGFVEDVRLSNVRLLIGAIIIVIALFAQFYK 62 Query: 105 KKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNA 1 KKFPE+++FLI+CI LYV+ N +LQLI YTKEKNA Sbjct: 63 KKFPENRDFLIACIALYVIFNGLLQLIIYTKEKNA 97 >gb|AFK45880.1| unknown [Medicago truncatula] Length = 184 Score = 135 bits (340), Expect = 3e-30 Identities = 62/95 (65%), Positives = 82/95 (86%) Frame = -3 Query: 285 SKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQFYP 106 +K K+ANL D +SIKH+LDES SE++ RG+ EDVK+SN+RLLLG++II++AL AQFY Sbjct: 3 TKGQKKANLLDHHSIKHILDESASEVITGRGYVEDVKLSNIRLLLGSVIIVIALFAQFYK 62 Query: 105 KKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNA 1 KKFPE+++FL++CI LYV+ N+VLQLI YTKEKNA Sbjct: 63 KKFPENRDFLLACIALYVVFNLVLQLIIYTKEKNA 97