BLASTX nr result
ID: Coptis24_contig00029853
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029853 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] 127 3e-41 ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2... 121 2e-39 ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2... 120 5e-38 ref|XP_003626787.1| 1-aminocyclopropane-1-carboxylate oxidase-li... 124 5e-38 ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo... 122 3e-37 >gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] Length = 370 Score = 127 bits (319), Expect(2) = 3e-41 Identities = 55/92 (59%), Positives = 78/92 (84%) Frame = +3 Query: 126 VQVRHKDHWVDVHPLPGSLVVNIGDLLQIASNDKFKSIEHRVLANHVGPRVSVARFLTPR 305 +Q+ H++HW+DV P+ G+LVVNIGDLLQ+ SNDKFKS+EHRV+ANH+GPRVSVA F TP Sbjct: 260 LQIFHQNHWIDVPPVHGALVVNIGDLLQLISNDKFKSVEHRVVANHIGPRVSVASFFTPH 319 Query: 306 FDMATKPFGPIKELISDESRPVYREISMNEYL 401 +T+ +GPIKEL+S+E+ P+Y EI++ +++ Sbjct: 320 LYPSTRLYGPIKELLSEENPPIYCEITVKDFI 351 Score = 66.2 bits (160), Expect(2) = 3e-41 Identities = 28/39 (71%), Positives = 32/39 (82%) Frame = +1 Query: 7 LVSHYYPACPEPELVLGNAKHTDPAFFAILLQNDIDGLQ 123 L+SHYYPACPEPEL +G KH+DP F ILLQ+DI GLQ Sbjct: 223 LLSHYYPACPEPELAMGTTKHSDPDFLTILLQDDIGGLQ 261 >ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1| predicted protein [Populus trichocarpa] Length = 374 Score = 121 bits (304), Expect(2) = 2e-39 Identities = 55/96 (57%), Positives = 78/96 (81%), Gaps = 4/96 (4%) Frame = +3 Query: 126 VQVRHKDHWVDVHPLPGSLVVNIGDLLQ----IASNDKFKSIEHRVLANHVGPRVSVARF 293 +Q+ H++HW+DV P+ G+LVVNIGDLLQ + SNDKFKS+EHRV+ANH+GPRVSVA F Sbjct: 260 LQIFHQNHWIDVPPVHGALVVNIGDLLQASTVLISNDKFKSVEHRVVANHIGPRVSVASF 319 Query: 294 LTPRFDMATKPFGPIKELISDESRPVYREISMNEYL 401 TP +T+ +GPIKEL+S+E+ P+Y EI++ +++ Sbjct: 320 FTPHLYPSTRLYGPIKELLSEENPPIYCEITVKDFI 355 Score = 66.2 bits (160), Expect(2) = 2e-39 Identities = 28/39 (71%), Positives = 32/39 (82%) Frame = +1 Query: 7 LVSHYYPACPEPELVLGNAKHTDPAFFAILLQNDIDGLQ 123 L+SHYYPACPEPEL +G KH+DP F ILLQ+DI GLQ Sbjct: 223 LLSHYYPACPEPELAMGTTKHSDPDFLTILLQDDIGGLQ 261 >ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1| predicted protein [Populus trichocarpa] Length = 379 Score = 120 bits (302), Expect(2) = 5e-38 Identities = 56/99 (56%), Positives = 77/99 (77%), Gaps = 7/99 (7%) Frame = +3 Query: 126 VQVRHKDHWVDVHPLPGSLVVNIGDLLQ-------IASNDKFKSIEHRVLANHVGPRVSV 284 +Q+ H+D WVD+ P+PG+LV+NIGDL+Q + SNDKFKS+EHRVLAN VGPR+SV Sbjct: 262 LQMLHQDQWVDIPPVPGALVINIGDLMQASFSFISLISNDKFKSVEHRVLANRVGPRISV 321 Query: 285 ARFLTPRFDMATKPFGPIKELISDESRPVYREISMNEYL 401 A F + F ++K +GPIKEL+S+ + P+YRE ++NEYL Sbjct: 322 ACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYL 360 Score = 62.0 bits (149), Expect(2) = 5e-38 Identities = 26/39 (66%), Positives = 31/39 (79%) Frame = +1 Query: 7 LVSHYYPACPEPELVLGNAKHTDPAFFAILLQNDIDGLQ 123 L+SHYYPACPEPEL LG +KH+D F +LLQ+ I GLQ Sbjct: 225 LISHYYPACPEPELTLGTSKHSDNDFLTVLLQDQIGGLQ 263 >ref|XP_003626787.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] gi|355520809|gb|AET01263.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] Length = 364 Score = 124 bits (310), Expect(2) = 5e-38 Identities = 55/92 (59%), Positives = 77/92 (83%) Frame = +3 Query: 126 VQVRHKDHWVDVHPLPGSLVVNIGDLLQIASNDKFKSIEHRVLANHVGPRVSVARFLTPR 305 +QV ++ WVDV P+PG+LV+NIGDLLQ+ +NDKFKS+EHRV+ANHVGPRVSVA F + Sbjct: 251 LQVLRENSWVDVSPVPGALVINIGDLLQLITNDKFKSVEHRVVANHVGPRVSVASFYSTS 310 Query: 306 FDMATKPFGPIKELISDESRPVYREISMNEYL 401 F +TK +GPIKEL+S+++ P YRE ++++Y+ Sbjct: 311 FQPSTKLYGPIKELVSEDNPPKYRETTVHDYV 342 Score = 58.9 bits (141), Expect(2) = 5e-38 Identities = 26/39 (66%), Positives = 29/39 (74%) Frame = +1 Query: 7 LVSHYYPACPEPELVLGNAKHTDPAFFAILLQNDIDGLQ 123 LV HYYP+CPEPEL LG KHTD F +LLQ+ I GLQ Sbjct: 214 LVCHYYPSCPEPELTLGITKHTDNDFITVLLQDHIGGLQ 252 >ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 374 Score = 122 bits (305), Expect(2) = 3e-37 Identities = 58/92 (63%), Positives = 74/92 (80%) Frame = +3 Query: 126 VQVRHKDHWVDVHPLPGSLVVNIGDLLQIASNDKFKSIEHRVLANHVGPRVSVARFLTPR 305 +QV + WVDV P+PG+LVVNIGDLLQ+ SNDKFKS+EHRVLAN +GPRVSVA F T Sbjct: 262 LQVLSHNGWVDVPPVPGALVVNIGDLLQLISNDKFKSVEHRVLANRIGPRVSVACFFTIH 321 Query: 306 FDMATKPFGPIKELISDESRPVYREISMNEYL 401 F +T+ +GPIKEL+S+E PVYRE S+ +++ Sbjct: 322 FYPSTRIYGPIKELLSEEXPPVYRETSLKDFI 353 Score = 58.5 bits (140), Expect(2) = 3e-37 Identities = 23/40 (57%), Positives = 31/40 (77%) Frame = +1 Query: 4 TLVSHYYPACPEPELVLGNAKHTDPAFFAILLQNDIDGLQ 123 +++ HYYP+CPEPEL +G +H+DP F ILLQ+ I GLQ Sbjct: 224 SILFHYYPSCPEPELTMGTTRHSDPDFLTILLQDHIGGLQ 263