BLASTX nr result

ID: Coptis24_contig00029849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029849
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251...   110   1e-22
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]   110   1e-22
ref|XP_002311852.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809...   107   8e-22

>ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251030 [Vitis vinifera]
          Length = 768

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/78 (64%), Positives = 61/78 (78%)
 Frame = -3

Query: 236 TPSMEEKLNKEILKAQALEASYIPGTDNIFDVRGNSIETVDIDQCICSCKGWQLTGLPCC 57
           TPSMEEKL KE +K + L+     G  N F+VRG++IE VDID   CSCKGWQLTGLPCC
Sbjct: 610 TPSMEEKLEKETVKVRPLQVLLSGG--NTFEVRGDTIEVVDIDHWDCSCKGWQLTGLPCC 667

Query: 56  HAIAIFNCIGRNPYDYCS 3
           HAIA+ +CIG++PY+YCS
Sbjct: 668 HAIAVISCIGQSPYEYCS 685


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/78 (64%), Positives = 61/78 (78%)
 Frame = -3

Query: 236 TPSMEEKLNKEILKAQALEASYIPGTDNIFDVRGNSIETVDIDQCICSCKGWQLTGLPCC 57
           TPSMEEKL KE +K + L+     G  N F+VRG++IE VDID   CSCKGWQLTGLPCC
Sbjct: 610 TPSMEEKLEKETVKVRPLQVLLSGG--NTFEVRGDTIEVVDIDHWDCSCKGWQLTGLPCC 667

Query: 56  HAIAIFNCIGRNPYDYCS 3
           HAIA+ +CIG++PY+YCS
Sbjct: 668 HAIAVISCIGQSPYEYCS 685


>ref|XP_002311852.1| predicted protein [Populus trichocarpa] gi|222851672|gb|EEE89219.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/78 (62%), Positives = 60/78 (76%)
 Frame = -3

Query: 236 TPSMEEKLNKEILKAQALEASYIPGTDNIFDVRGNSIETVDIDQCICSCKGWQLTGLPCC 57
           TPS EEKL KE+  A++L+     G+   F+VRG S++ VDID   CSCKGWQLTGLPCC
Sbjct: 106 TPSKEEKLEKEMSIARSLQVLLSHGST--FEVRGESVDVVDIDHWDCSCKGWQLTGLPCC 163

Query: 56  HAIAIFNCIGRNPYDYCS 3
           HA+A+F CIGR+PYDYCS
Sbjct: 164 HAVAVFECIGRSPYDYCS 181


>ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|222857301|gb|EEE94848.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/78 (62%), Positives = 59/78 (75%)
 Frame = -3

Query: 236 TPSMEEKLNKEILKAQALEASYIPGTDNIFDVRGNSIETVDIDQCICSCKGWQLTGLPCC 57
           TPS EEKL KE LK  +L+     G+  IF+VRG S+E VDID+  CSCK WQL+GLPCC
Sbjct: 425 TPSAEEKLEKESLKVHSLQVLLSAGS--IFEVRGESVEVVDIDRWDCSCKDWQLSGLPCC 482

Query: 56  HAIAIFNCIGRNPYDYCS 3
           HA+A+  CIGR+PYDYCS
Sbjct: 483 HALAVIGCIGRSPYDYCS 500


>ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809446 [Glycine max]
          Length = 748

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/78 (61%), Positives = 59/78 (75%)
 Frame = -3

Query: 236 TPSMEEKLNKEILKAQALEASYIPGTDNIFDVRGNSIETVDIDQCICSCKGWQLTGLPCC 57
           TPS EE L KE L A +L+  +  G+   F+VRG S++ VDID   CSCKGWQLTG+PCC
Sbjct: 591 TPSKEELLQKETLVAPSLQVLFSQGST--FEVRGESVDIVDIDNWDCSCKGWQLTGVPCC 648

Query: 56  HAIAIFNCIGRNPYDYCS 3
           HAIA+F C+GR+PYDYCS
Sbjct: 649 HAIAVFECVGRSPYDYCS 666


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