BLASTX nr result

ID: Coptis24_contig00029832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029832
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310538.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_004156362.1| PREDICTED: uncharacterized LOC101207357 isof...   124   8e-27
ref|XP_004147320.1| PREDICTED: uncharacterized protein LOC101207...   124   8e-27
gb|AAU04401.1| hypothetical protein [Citrus limon]                    124   8e-27
ref|NP_195074.2| uncharacterized protein [Arabidopsis thaliana] ...   122   4e-26

>ref|XP_002310538.1| predicted protein [Populus trichocarpa] gi|222853441|gb|EEE90988.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/82 (69%), Positives = 68/82 (82%)
 Frame = -2

Query: 486 YSEEDVFEFGTDDGQDVDGLPTEGVKITCFHQDGTNYMIYTPSDPLLFVAVKDNDGHLRI 307
           YSE+D+F+F TDDG+D+DGLP EGV+ITCFH DG +YMIYTPSDPLLFVAVKD DG L+I
Sbjct: 88  YSEDDIFDFRTDDGEDIDGLPNEGVEITCFHLDGAHYMIYTPSDPLLFVAVKDQDGQLQI 147

Query: 306 AXXXXXXXLAVVNAIDEETEFN 241
           A        A+++AIDEETEFN
Sbjct: 148 ADDDLLEDPAIISAIDEETEFN 169


>ref|XP_004156362.1| PREDICTED: uncharacterized LOC101207357 isoform 2 [Cucumis sativus]
          Length = 329

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/82 (69%), Positives = 66/82 (80%)
 Frame = -2

Query: 486 YSEEDVFEFGTDDGQDVDGLPTEGVKITCFHQDGTNYMIYTPSDPLLFVAVKDNDGHLRI 307
           YSE+D+F+F TDDGQDVDGLP EGV+ITCFH DG +YMIYTPSDPLLFVA+KD  G L I
Sbjct: 231 YSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTI 290

Query: 306 AXXXXXXXLAVVNAIDEETEFN 241
           A        A+++AIDEETEFN
Sbjct: 291 ADDELLEDPAIISAIDEETEFN 312


>ref|XP_004147320.1| PREDICTED: uncharacterized protein LOC101207357 [Cucumis sativus]
           gi|449482654|ref|XP_004156361.1| PREDICTED:
           uncharacterized LOC101207357 isoform 1 [Cucumis sativus]
          Length = 349

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/82 (69%), Positives = 66/82 (80%)
 Frame = -2

Query: 486 YSEEDVFEFGTDDGQDVDGLPTEGVKITCFHQDGTNYMIYTPSDPLLFVAVKDNDGHLRI 307
           YSE+D+F+F TDDGQDVDGLP EGV+ITCFH DG +YMIYTPSDPLLFVA+KD  G L I
Sbjct: 251 YSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTI 310

Query: 306 AXXXXXXXLAVVNAIDEETEFN 241
           A        A+++AIDEETEFN
Sbjct: 311 ADDELLEDPAIISAIDEETEFN 332


>gb|AAU04401.1| hypothetical protein [Citrus limon]
          Length = 108

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/82 (70%), Positives = 70/82 (85%)
 Frame = -2

Query: 486 YSEEDVFEFGTDDGQDVDGLPTEGVKITCFHQDGTNYMIYTPSDPLLFVAVKDNDGHLRI 307
           YSE+D+F+F TDDGQD+DGLPTEGV+ITCFH DG+++MIYTPSDPLL VAVKD +G L+I
Sbjct: 14  YSEDDIFDFRTDDGQDIDGLPTEGVEITCFHLDGSHFMIYTPSDPLLSVAVKDGNGQLQI 73

Query: 306 AXXXXXXXLAVVNAIDEETEFN 241
           A       LAV++AIDEETEFN
Sbjct: 74  ADDDLLEDLAVISAIDEETEFN 95


>ref|NP_195074.2| uncharacterized protein [Arabidopsis thaliana]
           gi|124301176|gb|ABN04840.1| At4g33480 [Arabidopsis
           thaliana] gi|332660832|gb|AEE86232.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 336

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/82 (68%), Positives = 69/82 (84%)
 Frame = -2

Query: 486 YSEEDVFEFGTDDGQDVDGLPTEGVKITCFHQDGTNYMIYTPSDPLLFVAVKDNDGHLRI 307
           Y+E++VF+F TDDGQDV+GLPTEGV+ITCFH DG++YM+YTPSDPLLFVA KD +G L+I
Sbjct: 237 YTEDNVFDFRTDDGQDVEGLPTEGVEITCFHLDGSHYMVYTPSDPLLFVAAKDQNGLLQI 296

Query: 306 AXXXXXXXLAVVNAIDEETEFN 241
           A        AV++AIDEETEFN
Sbjct: 297 ADDELLDDPAVISAIDEETEFN 318


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