BLASTX nr result

ID: Coptis24_contig00029825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029825
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|2...   245   2e-62
ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218...   244   3e-62
ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240...   242   1e-61
ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775...   238   3e-60
ref|XP_003520553.1| PREDICTED: uncharacterized protein LOC100795...   236   1e-59

>ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|222861160|gb|EEE98702.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  245 bits (625), Expect = 2e-62
 Identities = 121/177 (68%), Positives = 137/177 (77%)
 Frame = +3

Query: 192 SSNSVDTQTVXXXXXXXXDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTASR 371
           ++N VDTQT             +Q S++S+A    I+KDLKKVVQKTAATFAPRASTA++
Sbjct: 54  NANEVDTQTAKEDQATETS---NQVSSSSSAAPPAIDKDLKKVVQKTAATFAPRASTATK 110

Query: 372 NPAVPGSTLYTVFEVQAYASMLLGGVLSFNLLFPSNEPDIWRLIGMWSIWMFTIPSLRAR 551
           NPAVPG+TLYTVFEVQ Y  MLLGG LSFNL+FPSNEPDIWRL+GMWSIWMFTIPSLRAR
Sbjct: 111 NPAVPGTTLYTVFEVQGYVCMLLGGALSFNLIFPSNEPDIWRLMGMWSIWMFTIPSLRAR 170

Query: 552 DCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 722
           DCSKNEKEA                 FWKSF++VWSADTIAFFGMYAWK+GWLQKT+
Sbjct: 171 DCSKNEKEALNYLFLLVPLLNVTIPFFWKSFALVWSADTIAFFGMYAWKLGWLQKTE 227


>ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218251 [Cucumis sativus]
           gi|449491541|ref|XP_004158931.1| PREDICTED:
           uncharacterized protein LOC101231741 [Cucumis sativus]
          Length = 221

 Score =  244 bits (623), Expect = 3e-62
 Identities = 121/178 (67%), Positives = 133/178 (74%)
 Frame = +3

Query: 189 ASSNSVDTQTVXXXXXXXXDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 368
           A+SN + TQ V         I         A+    ++KDLKKVVQKTAATFAPRASTAS
Sbjct: 40  ANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSAPALDKDLKKVVQKTAATFAPRASTAS 99

Query: 369 RNPAVPGSTLYTVFEVQAYASMLLGGVLSFNLLFPSNEPDIWRLIGMWSIWMFTIPSLRA 548
           +NPAVPG+TLYTVFEVQ YASMLLGGVLSFNLLFPSNEPDIWRL+GMWSIWMFTIPSLRA
Sbjct: 100 KNPAVPGTTLYTVFEVQGYASMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRA 159

Query: 549 RDCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 722
           RDCSKNEKEA                 F KSF+VVWSADT+AFFGMYAWK+GW Q+TD
Sbjct: 160 RDCSKNEKEALNYLFLLVPLLNVIIPFFLKSFAVVWSADTVAFFGMYAWKLGWFQRTD 217


>ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera]
           gi|296086680|emb|CBI32315.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score =  242 bits (617), Expect = 1e-61
 Identities = 126/218 (57%), Positives = 148/218 (67%)
 Frame = +3

Query: 69  LSTSINTHLFKFPATLFITRNNSIKLSGFCKREERIPKFIASSNSVDTQTVXXXXXXXXD 248
           ++T I T     P +   T  ++ + + F  +  RI    A+SN VDTQTV         
Sbjct: 1   MNTIIPTSFCHCPISKLGTTFSTPRYTQFRTKTTRIH---ANSNEVDTQTVEERTEEESQ 57

Query: 249 IKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTASRNPAVPGSTLYTVFEVQAYA 428
              +   +  ++    ++KDLKKVVQKTAATFAPRASTA++NPAVPG+ LYTVFEVQ Y 
Sbjct: 58  NNGASNISTPSSTAPALDKDLKKVVQKTAATFAPRASTATKNPAVPGTVLYTVFEVQGYL 117

Query: 429 SMLLGGVLSFNLLFPSNEPDIWRLIGMWSIWMFTIPSLRARDCSKNEKEAXXXXXXXXXX 608
           SMLLGG LSFN LFPSNEPDIWRL+GMWSIWMFTIPSLRARDCSKNEKEA          
Sbjct: 118 SMLLGGALSFNFLFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKEALNYLFLIIPL 177

Query: 609 XXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 722
                  FWKSF+VVWSADT+AF GMYAWK+GWLQK D
Sbjct: 178 LNIMIPFFWKSFAVVWSADTVAFVGMYAWKLGWLQKED 215


>ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775266 [Glycine max]
          Length = 236

 Score =  238 bits (606), Expect = 3e-60
 Identities = 114/178 (64%), Positives = 134/178 (75%)
 Frame = +3

Query: 189 ASSNSVDTQTVXXXXXXXXDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 368
           A+S+ VDTQTV         ++++     ++   S I+K+LKKV QKTAATFAPRASTA+
Sbjct: 59  ATSDEVDTQTVVEELAEEKKVEENTNEDNTSTFSSPIDKELKKVAQKTAATFAPRASTAT 118

Query: 369 RNPAVPGSTLYTVFEVQAYASMLLGGVLSFNLLFPSNEPDIWRLIGMWSIWMFTIPSLRA 548
           +NPAVPG+ LY+VFEVQ Y SMLLGG LSFNL+FPS+EPDIWRL+GMWSIWMFTIPSLRA
Sbjct: 119 KNPAVPGTVLYSVFEVQGYVSMLLGGALSFNLIFPSDEPDIWRLMGMWSIWMFTIPSLRA 178

Query: 549 RDCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 722
           RDCSKNEKEA                 FWKSF+VVWSAD +AF GMYAWK GWLQ+TD
Sbjct: 179 RDCSKNEKEALNYLFLLIPLINVIIPFFWKSFAVVWSADVVAFLGMYAWKFGWLQRTD 236


>ref|XP_003520553.1| PREDICTED: uncharacterized protein LOC100795293 [Glycine max]
          Length = 294

 Score =  236 bits (601), Expect = 1e-59
 Identities = 114/180 (63%), Positives = 137/180 (76%), Gaps = 2/180 (1%)
 Frame = +3

Query: 189 ASSNSVDTQTVXXXXXXXXDIKDS--QPSTASAAGGSDIEKDLKKVVQKTAATFAPRAST 362
           A+S+ VDTQTV         ++++  + +T ++   + I+K+LKKV QKTAATFAPRAST
Sbjct: 115 ATSDEVDTQTVVEELSEENKVEENTNEDNTNTSTFSAPIDKELKKVAQKTAATFAPRAST 174

Query: 363 ASRNPAVPGSTLYTVFEVQAYASMLLGGVLSFNLLFPSNEPDIWRLIGMWSIWMFTIPSL 542
           A++NPAVPG+ LY+VFEVQ Y SMLLGG LSFNL+FPS+EPDIWRL+GMWSIWMFTIPSL
Sbjct: 175 ATKNPAVPGTVLYSVFEVQGYVSMLLGGALSFNLIFPSDEPDIWRLMGMWSIWMFTIPSL 234

Query: 543 RARDCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 722
           RARDCSKNEKEA                 FWKSF+VVWSAD +AF GMYAWK GWLQ+TD
Sbjct: 235 RARDCSKNEKEALNYLFLLVPLINVIIPFFWKSFAVVWSADVVAFLGMYAWKFGWLQRTD 294


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