BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029822
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 prote...   102   3e-20
ref|XP_004171080.1| PREDICTED: uncharacterized protein LOC101231...    93   3e-17
ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217...    93   3e-17
ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcr...    86   3e-15

>ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 protein-like [Vitis
           vinifera]
          Length = 757

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/107 (45%), Positives = 77/107 (71%)
 Frame = +3

Query: 3   KPELESLLLQNYTHSKFHNLLHNVIATPSVLLAASKNLYPNTSSSHAFNYNVLSHRLSIE 182
           KP+L++L++ +Y+  KF NL+ NV+A+P VLL A +NL P ++  ++     ++ R S+E
Sbjct: 39  KPQLKALVINHYSRGKFSNLIQNVVASPPVLLLACQNLTPRSNDVNSLASPAVALRFSVE 98

Query: 183 QLVCEIKSNQFDVGATCVKIMPCTSNGDCLVLPDMKLKVVIEAIRMV 323
           +L  E+  N+FDV + CV+++P    G+ LVLP++KLKVVIEAIRMV
Sbjct: 99  ELGRELGENRFDVESCCVRMVPSRKKGESLVLPNLKLKVVIEAIRMV 145


>ref|XP_004171080.1| PREDICTED: uncharacterized protein LOC101231062 [Cucumis sativus]
          Length = 768

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/109 (44%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
 Frame = +3

Query: 9   ELESLLLQNYTHSKFHNLLHNVIATPSVLLAASKNL----YPNTSSSHAFNYNVLSHRLS 176
           +L++L+L  ++H KF +L  NV+A+PSVLL AS+NL    + N   S    ++++S   S
Sbjct: 116 QLKALVLSRFSHGKFVDLFQNVVASPSVLLTASQNLITPPFSNAPDSLPL-FDLVSKCFS 174

Query: 177 IEQLVCEIKSNQFDVGATCVKIMPCTSNGDCLVLPDMKLKVVIEAIRMV 323
           +E +  E+  N+FDVGA CV + P    G+ L+LP++KLKV+IEAIRMV
Sbjct: 175 VEVMARELSENRFDVGACCVPMAPLEEKGESLLLPNLKLKVLIEAIRMV 223


>ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217546 [Cucumis sativus]
          Length = 751

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/109 (44%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
 Frame = +3

Query: 9   ELESLLLQNYTHSKFHNLLHNVIATPSVLLAASKNL----YPNTSSSHAFNYNVLSHRLS 176
           +L++L+L  ++H KF +L  NV+A+PSVLL AS+NL    + N   S    ++++S   S
Sbjct: 99  QLKALVLSRFSHGKFVDLFQNVVASPSVLLTASQNLITPPFSNAPDSLPL-FDLVSKCFS 157

Query: 177 IEQLVCEIKSNQFDVGATCVKIMPCTSNGDCLVLPDMKLKVVIEAIRMV 323
           +E +  E+  N+FDVGA CV + P    G+ L+LP++KLKV+IEAIRMV
Sbjct: 158 VEVMARELSENRFDVGACCVPMAPLEEKGESLLLPNLKLKVLIEAIRMV 206


>ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|222854883|gb|EEE92430.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 16/122 (13%)
 Frame = +3

Query: 6   PELESLLLQNYTHSKFHNLLHNVIATPSVLLAASKNLYPNTSSS---------------- 137
           P+L++L+L  Y+H KF NL+ NV+  PSVLL AS+NL  + S+                 
Sbjct: 57  PQLKTLVLSQYSHGKFSNLIQNVVGLPSVLLTASQNLITHHSNDGLNCTESNELAESTQP 116

Query: 138 HAFNYNVLSHRLSIEQLVCEIKSNQFDVGATCVKIMPCTSNGDCLVLPDMKLKVVIEAIR 317
           +   Y+ +S R SIE++  EI  N+FD+ A CVK+   +  G+ LVLP++KLKV IEAIR
Sbjct: 117 NLSLYHSVSKRFSIEEMGREIFENRFDIEAHCVKM---SDEGETLVLPNLKLKVFIEAIR 173

Query: 318 MV 323
           +V
Sbjct: 174 IV 175


>ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcriptase) [Arabidopsis
           thaliana] gi|332003308|gb|AED90691.1| RNA-directed DNA
           polymerase (reverse transcriptase) [Arabidopsis
           thaliana]
          Length = 695

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/107 (45%), Positives = 72/107 (67%)
 Frame = +3

Query: 3   KPELESLLLQNYTHSKFHNLLHNVIATPSVLLAASKNLYPNTSSSHAFNYNVLSHRLSIE 182
           K ELE+L+L+ Y+H KF++L+ N ++ P VLLAA +NL  + +SS      V S R SIE
Sbjct: 46  KSELEALVLKQYSHGKFYSLVKNAVSLPCVLLAACQNLSLSANSSGDLADRV-SRRFSIE 104

Query: 183 QLVCEIKSNQFDVGATCVKIMPCTSNGDCLVLPDMKLKVVIEAIRMV 323
           ++  EI+  +FD+ + CV+ +        LVLP++KLKV+IEAIRMV
Sbjct: 105 EMGREIREGRFDIRSCCVEFI-----SSSLVLPNLKLKVLIEAIRMV 146