BLASTX nr result

ID: Coptis24_contig00029813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029813
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318999.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|NP_187190.1| uncharacterized protein [Arabidopsis thaliana] ...   112   2e-23
ref|XP_002884510.1| hypothetical protein ARALYDRAFT_477828 [Arab...   112   3e-23
ref|XP_003518817.1| PREDICTED: uncharacterized protein LOC100782...   112   4e-23
ref|XP_004135617.1| PREDICTED: uncharacterized protein LOC101207...   110   1e-22

>ref|XP_002318999.1| predicted protein [Populus trichocarpa] gi|222857375|gb|EEE94922.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = -3

Query: 312 GLLWIDRFFCNRKDLDDYMYMFLQFRYKKHKWVISPKAKDEVYLSALLEKPPR 154
           GLLWIDRFFCNRKDLDDYMYMFLQFRYKKH+W ISPK+KDEVYLSALLEKPPR
Sbjct: 261 GLLWIDRFFCNRKDLDDYMYMFLQFRYKKHRWAISPKSKDEVYLSALLEKPPR 313


>ref|NP_187190.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7596772|gb|AAF64543.1| hypothetical protein
           [Arabidopsis thaliana] gi|50058925|gb|AAT69207.1|
           hypothetical protein At3g05390 [Arabidopsis thaliana]
           gi|332640711|gb|AEE74232.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 463

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/55 (89%), Positives = 53/55 (96%)
 Frame = -3

Query: 312 GLLWIDRFFCNRKDLDDYMYMFLQFRYKKHKWVISPKAKDEVYLSALLEKPPRSL 148
           GLLWIDRFFC +KDLDDYMYMFLQFRYKKHKW ISPK+KDEVYLSALLEKPPR++
Sbjct: 409 GLLWIDRFFCKKKDLDDYMYMFLQFRYKKHKWAISPKSKDEVYLSALLEKPPRAI 463


>ref|XP_002884510.1| hypothetical protein ARALYDRAFT_477828 [Arabidopsis lyrata subsp.
           lyrata] gi|297330350|gb|EFH60769.1| hypothetical protein
           ARALYDRAFT_477828 [Arabidopsis lyrata subsp. lyrata]
          Length = 463

 Score =  112 bits (280), Expect = 3e-23
 Identities = 48/55 (87%), Positives = 53/55 (96%)
 Frame = -3

Query: 312 GLLWIDRFFCNRKDLDDYMYMFLQFRYKKHKWVISPKAKDEVYLSALLEKPPRSL 148
           GLLWIDRFFC +KDLDDYMYMFLQFRYKKHKW +SPK+KDEVYLSALLEKPPR++
Sbjct: 409 GLLWIDRFFCKKKDLDDYMYMFLQFRYKKHKWAVSPKSKDEVYLSALLEKPPRAI 463


>ref|XP_003518817.1| PREDICTED: uncharacterized protein LOC100782372 [Glycine max]
          Length = 463

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/55 (89%), Positives = 53/55 (96%)
 Frame = -3

Query: 312 GLLWIDRFFCNRKDLDDYMYMFLQFRYKKHKWVISPKAKDEVYLSALLEKPPRSL 148
           GLLWIDRFFCNR DLDDYMYMFLQ RYKKHKWVISPK+K+EVYLSALLEKPPR++
Sbjct: 409 GLLWIDRFFCNRNDLDDYMYMFLQLRYKKHKWVISPKSKEEVYLSALLEKPPRAI 463


>ref|XP_004135617.1| PREDICTED: uncharacterized protein LOC101207467 [Cucumis sativus]
           gi|449485703|ref|XP_004157250.1| PREDICTED:
           uncharacterized LOC101207467 [Cucumis sativus]
          Length = 473

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = -3

Query: 312 GLLWIDRFFCNRKDLDDYMYMFLQFRYKKHKWVISPKAKDEVYLSALLEKPPRSL 148
           GLLWIDRFFC+RKDLDDYMYMFLQFRYKKHKW I+PK+K+EVYLSALLEKPPR++
Sbjct: 419 GLLWIDRFFCDRKDLDDYMYMFLQFRYKKHKWSIAPKSKNEVYLSALLEKPPRAI 473


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