BLASTX nr result

ID: Coptis24_contig00029812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029812
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   129   6e-28
emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]   129   6e-28
ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   128   8e-28
emb|CBI28618.3| unnamed protein product [Vitis vinifera]              127   2e-27
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   122   7e-26

>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score =  129 bits (323), Expect = 6e-28
 Identities = 78/192 (40%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
 Frame = -3

Query: 642  KPHLRRLKLLWRGASDNNDE--QEVLAGLRPHQNIKELQIEHYGGARFPGWIGDYXXXXX 469
            K +LRRL+L W           +E+L  L PH N+KEL+I+ Y GA+FP W+G Y     
Sbjct: 708  KQYLRRLELKWSPGHHMPHAIGEELLECLEPHGNLKELKIDVYHGAKFPNWMG-YSLLSR 766

Query: 468  XXXXXXXNCWKCSILPPLGQLPVLKSLIIASMPSVKYVDDSFCGAGLVRAFPSLEILAFD 289
                    C    ILPPLGQLP+LK L I +M  ++ +   FCG G +R FPSLE +  +
Sbjct: 767  LERIELSQCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFCGEGQIRGFPSLEKMKLE 826

Query: 288  NMASFLRWDGLEEGDIPRLRTLTISSCLKLTSLPKIQYFRSLEHLEISDCSQLPVLPKEA 109
            +M +   W  +EEGD PRL  LTI +     SLPK   F SL  L + +C+++ +L    
Sbjct: 827  DMKNLKEWHEIEEGDFPRLHELTIKNSPNFASLPK---FPSLCDLVLDECNEM-ILGSVQ 882

Query: 108  VPVSLSSLVINS 73
               SLSSL I++
Sbjct: 883  FLSSLSSLKISN 894


>emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]
          Length = 951

 Score =  129 bits (323), Expect = 6e-28
 Identities = 78/192 (40%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
 Frame = -3

Query: 642  KPHLRRLKLLWRGASDNNDE--QEVLAGLRPHQNIKELQIEHYGGARFPGWIGDYXXXXX 469
            K +LRRL+L W           +E+L  L PH N+KEL+I+ Y GA+FP W+G Y     
Sbjct: 568  KQYLRRLELKWSPGHHMPHAIGEELLECLEPHGNLKELKIDVYHGAKFPNWMG-YSLLSR 626

Query: 468  XXXXXXXNCWKCSILPPLGQLPVLKSLIIASMPSVKYVDDSFCGAGLVRAFPSLEILAFD 289
                    C    ILPPLGQLP+LK L I +M  ++ +   FCG G +R FPSLE +  +
Sbjct: 627  LERIELSQCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFCGEGQIRGFPSLEKMKLE 686

Query: 288  NMASFLRWDGLEEGDIPRLRTLTISSCLKLTSLPKIQYFRSLEHLEISDCSQLPVLPKEA 109
            +M +   W  +EEGD PRL  LTI +     SLPK   F SL  L + +C+++ +L    
Sbjct: 687  DMKNLKEWHEIEEGDFPRLHELTIKNSPNFASLPK---FPSLCDLVLDECNEM-ILGSVQ 742

Query: 108  VPVSLSSLVINS 73
               SLSSL I++
Sbjct: 743  FLSSLSSLKISN 754


>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 961

 Score =  128 bits (322), Expect = 8e-28
 Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 2/192 (1%)
 Frame = -3

Query: 642  KPHLRRLKLLWRGASD--NNDEQEVLAGLRPHQNIKELQIEHYGGARFPGWIGDYXXXXX 469
            K +LRRL+L W       +   +E+L  L PH N+KEL+I+ Y GA+FP W+G Y     
Sbjct: 615  KQYLRRLELKWSPGHHMPHATGEELLECLEPHGNLKELKIDVYHGAKFPNWMG-YSLLPR 673

Query: 468  XXXXXXXNCWKCSILPPLGQLPVLKSLIIASMPSVKYVDDSFCGAGLVRAFPSLEILAFD 289
                    C    ILPPLGQLP+LK L I +M  ++ +   FCG G +R FPSLE +  +
Sbjct: 674  LERIELSQCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFCGEGQIRGFPSLEKMKLE 733

Query: 288  NMASFLRWDGLEEGDIPRLRTLTISSCLKLTSLPKIQYFRSLEHLEISDCSQLPVLPKEA 109
            +M +   W  +E+GD PRL  LTI +     SLPK   F SL  L + +C+++ +L    
Sbjct: 734  DMKNLKEWHEIEDGDFPRLHELTIKNSPNFASLPK---FPSLCDLVLDECNEM-ILGSVQ 789

Query: 108  VPVSLSSLVINS 73
               SLSSL I++
Sbjct: 790  FLSSLSSLKISN 801


>emb|CBI28618.3| unnamed protein product [Vitis vinifera]
          Length = 1278

 Score =  127 bits (318), Expect = 2e-27
 Identities = 82/199 (41%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
 Frame = -3

Query: 642  KPHLRRLKLLW----RGASDNNDEQEVLAGLRPHQNIKELQIEHYGGARFPGWIGDYXXX 475
            K +L +L L W     G  D   E E+L  L+PH+N+K L IE+YGG  FP W+GD    
Sbjct: 624  KEYLEKLVLEWIGIFDGTRDEKVENEILDMLQPHENLKNLSIEYYGGTEFPSWVGD-PSF 682

Query: 474  XXXXXXXXXNCWKCSILPPLGQLPVLKSLIIASMPSVKYVDDSFCG--AGLVRAFPSLEI 301
                      C KC  LP LGQLP+LK LII  M  +K+V   F G     +  F SLE 
Sbjct: 683  SKMEYLNLKGCKKCISLPSLGQLPLLKELIIEGMDGIKHVGPQFYGDDYSSIDPFQSLET 742

Query: 300  LAFDNMASFLRWDGLEEGDI---PRLRTLTISSCLKLTS-LPKIQYFRSLEHLEISDCSQ 133
            L F+N+  +  W    +G +   P LR L+I  C KLTS LP   Y  SLE + I DC +
Sbjct: 743  LKFENIEEWEEWSSFGDGGVEGFPCLRELSIFKCPKLTSKLP--NYLPSLEGVWIDDCEK 800

Query: 132  LPVLPKEAVPVSLSSLVIN 76
            L VLPK    ++L  L  N
Sbjct: 801  LAVLPKLVKLLNLDLLGSN 819


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1093

 Score =  122 bits (305), Expect = 7e-26
 Identities = 69/190 (36%), Positives = 105/190 (55%)
 Frame = -3

Query: 642  KPHLRRLKLLWRGASDNNDEQEVLAGLRPHQNIKELQIEHYGGARFPGWIGDYXXXXXXX 463
            K ++  L L W     +  + E+L  L PH N++EL+I+ Y GA+FP W+G Y       
Sbjct: 712  KQYINELVLRWGRCRPDGIDDELLECLEPHTNLRELRIDVYPGAKFPNWMG-YSSLSHLE 770

Query: 462  XXXXXNCWKCSILPPLGQLPVLKSLIIASMPSVKYVDDSFCGAGLVRAFPSLEILAFDNM 283
                 +C  C  LPPLGQLP LKSL I  M  V+ +   F G G ++ FPSLE L  ++M
Sbjct: 771  KIEFFHCNYCKTLPPLGQLPSLKSLSIYMMCEVENIGREFYGEGKIKGFPSLEKLKLEDM 830

Query: 282  ASFLRWDGLEEGDIPRLRTLTISSCLKLTSLPKIQYFRSLEHLEISDCSQLPVLPKEAVP 103
             +   W  ++ G+ P+L+ L + +C  ++SLPK   F +L  L + DC++  +     + 
Sbjct: 831  RNLKEWQEIDHGEFPKLQELAVLNCPNISSLPK---FPALCELLLDDCNE-TIWSSVPLL 886

Query: 102  VSLSSLVINS 73
             SLSSL I++
Sbjct: 887  TSLSSLKISN 896


Top