BLASTX nr result

ID: Coptis24_contig00029808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029808
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307757.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]            183   1e-44
ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
gb|AAO49839.1| ornithine decarboxylase [Vitis vinifera]               172   3e-41

>ref|XP_002307757.1| predicted protein [Populus trichocarpa] gi|222857206|gb|EEE94753.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/110 (79%), Positives = 99/110 (90%)
 Frame = -3

Query: 333 MHILNIGGGFSVGHQYEDAAVTITAALQAYFANYPGLTVISEPGRFFAETSFTLATNIIG 154
           M ILNIGGGF+ G Q+++AA TI +ALQAYF N PGLTVISEPGRFFAE++FTLATNIIG
Sbjct: 70  MKILNIGGGFTAGSQFDEAATTIKSALQAYFPNEPGLTVISEPGRFFAESAFTLATNIIG 129

Query: 153 KRVRGELREYWINDGIYGSMNCILYDHATVKATPLACSSSRANPTCRGLR 4
           KRVRG+LREYWINDGIYGSMNCILYDHAT+  TPLAC+S+ AN TC+GLR
Sbjct: 130 KRVRGDLREYWINDGIYGSMNCILYDHATITCTPLACNSNHANLTCKGLR 179


>ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|222857205|gb|EEE94752.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/110 (79%), Positives = 99/110 (90%)
 Frame = -3

Query: 333 MHILNIGGGFSVGHQYEDAAVTITAALQAYFANYPGLTVISEPGRFFAETSFTLATNIIG 154
           M ILNIGGGF+ G Q+++AA TI +ALQAYF N PGLTVISEPGRFFAE++FTLATNIIG
Sbjct: 241 MKILNIGGGFTAGSQFDEAATTIKSALQAYFPNEPGLTVISEPGRFFAESAFTLATNIIG 300

Query: 153 KRVRGELREYWINDGIYGSMNCILYDHATVKATPLACSSSRANPTCRGLR 4
           KRVRG+LREYWINDGIYGSMNCILYDHAT+  TPLAC+S+ AN TC+GLR
Sbjct: 301 KRVRGDLREYWINDGIYGSMNCILYDHATITCTPLACNSNHANLTCKGLR 350


>gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]
          Length = 413

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/111 (75%), Positives = 97/111 (87%)
 Frame = -3

Query: 336 RMHILNIGGGFSVGHQYEDAAVTITAALQAYFANYPGLTVISEPGRFFAETSFTLATNII 157
           RM +LNIGGGF+ G Q+++AA  I +ALQ YF N PGLT+ISEPGRFFAE++FTLATN+I
Sbjct: 238 RMTMLNIGGGFTAGSQFDEAATAIKSALQTYFPNEPGLTIISEPGRFFAESAFTLATNVI 297

Query: 156 GKRVRGELREYWINDGIYGSMNCILYDHATVKATPLACSSSRANPTCRGLR 4
           G+RVRGELREYWINDGIYGSMNCILYDHATV   PLAC+SSRANP C+G R
Sbjct: 298 GRRVRGELREYWINDGIYGSMNCILYDHATVTCKPLACTSSRANPMCKGAR 348


>ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|222842403|gb|EEE79950.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/109 (75%), Positives = 95/109 (87%)
 Frame = -3

Query: 336 RMHILNIGGGFSVGHQYEDAAVTITAALQAYFANYPGLTVISEPGRFFAETSFTLATNII 157
           RM ILNIGGGF+ G  +++AA +I  ALQAYF N PGLT+ISEPGRFFAE+ FTLATN+I
Sbjct: 205 RMTILNIGGGFTAGSLFDEAATSIKPALQAYFPNEPGLTIISEPGRFFAESPFTLATNVI 264

Query: 156 GKRVRGELREYWINDGIYGSMNCILYDHATVKATPLACSSSRANPTCRG 10
           GKRVRGELREYWINDGIYGS+NCIL DHAT+  TPLAC+S+ ANPTC+G
Sbjct: 265 GKRVRGELREYWINDGIYGSLNCILNDHATITCTPLACNSNSANPTCKG 313


>gb|AAO49839.1| ornithine decarboxylase [Vitis vinifera]
          Length = 276

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/112 (70%), Positives = 94/112 (83%)
 Frame = -3

Query: 336 RMHILNIGGGFSVGHQYEDAAVTITAALQAYFANYPGLTVISEPGRFFAETSFTLATNII 157
           RMH+LNIGGGF+ G  ++DA   I ++LQAYF N  GLT+I+EPGR+FAE++FTL TNII
Sbjct: 159 RMHVLNIGGGFTXGPHFDDATXAIKSSLQAYFPNEHGLTIIAEPGRYFAESAFTLVTNII 218

Query: 156 GKRVRGELREYWINDGIYGSMNCILYDHATVKATPLACSSSRANPTCRGLRT 1
           GKRVR ELREYWINDGIYGS+NCIL DHATV A PLAC+S+  NPTCR +RT
Sbjct: 219 GKRVRSELREYWINDGIYGSLNCILNDHATVTAKPLACTSNSVNPTCRRVRT 270


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