BLASTX nr result

ID: Coptis24_contig00029799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029799
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = +3

Query: 3   NIRGLNQRFKQYEVKDMIRRSELSIMGIVETRVKQQNVQAVSNVCCPGWLVEHNYEYSES 182
           NIRGLN   K  E++ +I +  +++ G+VETRVK +N   VS +    W   +NY++S  
Sbjct: 7   NIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCR 66

Query: 183 GRIWCCWNPQRCSV 224
           GRIW CWN     V
Sbjct: 67  GRIWVCWNADTVKV 80


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +3

Query: 3   NIRGLNQRFKQYEVKDMIRRSELSIMGIVETRVKQQNVQAVSNVCCPGWLVEHNYEYSES 182
           NIRGLN   K  E+  +I +  +++ G+VETRVK +N   VS +    W   +NY++S  
Sbjct: 461 NIRGLNDPIKHSELHRLIHQERITLFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCR 520

Query: 183 GRIWCCWNPQRCSV 224
           GRIW CWN     V
Sbjct: 521 GRIWVCWNADTVKV 534


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/74 (40%), Positives = 44/74 (59%)
 Frame = +3

Query: 3    NIRGLNQRFKQYEVKDMIRRSELSIMGIVETRVKQQNVQAVSNVCCPGWLVEHNYEYSES 182
            NIRGLN   K  E++ +I +  +++ G+VETRVK +N   V+ +    W   +NY++S  
Sbjct: 812  NIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKYNVTQLLLRSWSFLYNYDFSCR 871

Query: 183  GRIWCCWNPQRCSV 224
            GRIW CWN     V
Sbjct: 872  GRIWVCWNADTVKV 885



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/72 (38%), Positives = 42/72 (58%)
 Frame = +3

Query: 9   RGLNQRFKQYEVKDMIRRSELSIMGIVETRVKQQNVQAVSNVCCPGWLVEHNYEYSESGR 188
           RGLN   K  E++ +I +  +++ G+VETRVK +N   V+ +    W   +NY++S  GR
Sbjct: 533 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592

Query: 189 IWCCWNPQRCSV 224
           IW CWN     V
Sbjct: 593 IWVCWNADTVKV 604


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/72 (40%), Positives = 42/72 (58%)
 Frame = +3

Query: 9   RGLNQRFKQYEVKDMIRRSELSIMGIVETRVKQQNVQAVSNVCCPGWLVEHNYEYSESGR 188
           RGLN   K  E++ +I +  +++ G+VETRVK +N   VS +    W   +NY++S  GR
Sbjct: 533 RGLNDPIKHSELRQLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGR 592

Query: 189 IWCCWNPQRCSV 224
           IW CWN     V
Sbjct: 593 IWVCWNADTVKV 604


>ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|222874271|gb|EEF11402.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/72 (40%), Positives = 42/72 (58%)
 Frame = +3

Query: 9   RGLNQRFKQYEVKDMIRRSELSIMGIVETRVKQQNVQAVSNVCCPGWLVEHNYEYSESGR 188
           RGLN   K  E++ +I +  +++ G+VETRVK +N   VS +    W   +NY++S  GR
Sbjct: 125 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGR 184

Query: 189 IWCCWNPQRCSV 224
           IW CWN     V
Sbjct: 185 IWVCWNADTVKV 196


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