BLASTX nr result
ID: Coptis24_contig00029792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029792 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510568.1| hypothetical protein RCOM_1598630 [Ricinus c... 80 1e-13 emb|CBI28490.3| unnamed protein product [Vitis vinifera] 80 2e-13 ref|NP_195998.2| protein TRF-like 10 [Arabidopsis thaliana] gi|2... 74 2e-11 emb|CAB82943.1| myb-like protein [Arabidopsis thaliana] gi|97580... 74 2e-11 dbj|BAC42517.1| myb like protein [Arabidopsis thaliana] 74 2e-11 >ref|XP_002510568.1| hypothetical protein RCOM_1598630 [Ricinus communis] gi|223551269|gb|EEF52755.1| hypothetical protein RCOM_1598630 [Ricinus communis] Length = 422 Score = 80.5 bits (197), Expect = 1e-13 Identities = 42/105 (40%), Positives = 58/105 (55%) Frame = -1 Query: 327 ETAVNHNEDKIVSRKSVRCTRSTKYSSNPAIPDSRRKKLPWSHXXXXXXXEAVKIFSVKC 148 E A N NE I +KS + K +N + P +RK+L W E V+ FS Sbjct: 316 EKARNQNEKVIPLKKSRQTQAPAKKLTNLSFPHEKRKRLHWKPEEEEMLREGVQKFSTTV 375 Query: 147 RENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMVKEGYTSEEGST 13 +NL W+ +LE+G HVF +RTP DLKDKWRN+V + ++ G T Sbjct: 376 NKNLPWKKILEFGHHVFDGSRTPADLKDKWRNIVAKDSSAVNGRT 420 >emb|CBI28490.3| unnamed protein product [Vitis vinifera] Length = 566 Score = 80.1 bits (196), Expect = 2e-13 Identities = 42/94 (44%), Positives = 56/94 (59%) Frame = -1 Query: 327 ETAVNHNEDKIVSRKSVRCTRSTKYSSNPAIPDSRRKKLPWSHXXXXXXXEAVKIFSVKC 148 + A + ++ IVS KS++ +K +N P+ RRKKL W E V+ FS Sbjct: 469 KNAGDGTKEVIVSSKSIQPRGPSKQLTNQIFPNERRKKLLWKTDEEEMLKEGVQKFSATG 528 Query: 147 RENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46 +NL WR +LE+G HVF TRTPVDLKDKWR M+ Sbjct: 529 DKNLPWRKILEFGRHVFDGTRTPVDLKDKWRKML 562 >ref|NP_195998.2| protein TRF-like 10 [Arabidopsis thaliana] gi|225898885|dbj|BAH30573.1| hypothetical protein [Arabidopsis thaliana] gi|332003270|gb|AED90653.1| protein TRF-like 10 [Arabidopsis thaliana] Length = 420 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/71 (46%), Positives = 47/71 (66%) Frame = -1 Query: 225 RRKKLPWSHXXXXXXXEAVKIFSVKCRENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46 +R++L W++ V+ F+ + +N+ WR +LE G VFHETRTP DLKDKWR+MV Sbjct: 344 QRRRLLWTYEEEEMLKVGVEKFAAEANKNMPWRKILEMGEKVFHETRTPADLKDKWRSMV 403 Query: 45 KEGYTSEEGST 13 K +E+GST Sbjct: 404 KIMNKNEQGST 414 >emb|CAB82943.1| myb-like protein [Arabidopsis thaliana] gi|9758006|dbj|BAB08603.1| Myb-like protein [Arabidopsis thaliana] gi|41619056|gb|AAS10013.1| MYB transcription factor [Arabidopsis thaliana] Length = 412 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/71 (46%), Positives = 47/71 (66%) Frame = -1 Query: 225 RRKKLPWSHXXXXXXXEAVKIFSVKCRENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46 +R++L W++ V+ F+ + +N+ WR +LE G VFHETRTP DLKDKWR+MV Sbjct: 336 QRRRLLWTYEEEEMLKVGVEKFAAEANKNMPWRKILEMGEKVFHETRTPADLKDKWRSMV 395 Query: 45 KEGYTSEEGST 13 K +E+GST Sbjct: 396 KIMNKNEQGST 406 >dbj|BAC42517.1| myb like protein [Arabidopsis thaliana] Length = 420 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/71 (46%), Positives = 47/71 (66%) Frame = -1 Query: 225 RRKKLPWSHXXXXXXXEAVKIFSVKCRENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46 +R++L W++ V+ F+ + +N+ WR +LE G VFHETRTP DLKDKWR+MV Sbjct: 344 QRRRLLWTYEEEEMLKVGVEKFAAEANKNMPWRKILEMGEKVFHETRTPADLKDKWRSMV 403 Query: 45 KEGYTSEEGST 13 K +E+GST Sbjct: 404 KIMNKNEQGST 414