BLASTX nr result

ID: Coptis24_contig00029792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029792
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510568.1| hypothetical protein RCOM_1598630 [Ricinus c...    80   1e-13
emb|CBI28490.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|NP_195998.2| protein TRF-like 10 [Arabidopsis thaliana] gi|2...    74   2e-11
emb|CAB82943.1| myb-like protein [Arabidopsis thaliana] gi|97580...    74   2e-11
dbj|BAC42517.1| myb like protein [Arabidopsis thaliana]                74   2e-11

>ref|XP_002510568.1| hypothetical protein RCOM_1598630 [Ricinus communis]
           gi|223551269|gb|EEF52755.1| hypothetical protein
           RCOM_1598630 [Ricinus communis]
          Length = 422

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/105 (40%), Positives = 58/105 (55%)
 Frame = -1

Query: 327 ETAVNHNEDKIVSRKSVRCTRSTKYSSNPAIPDSRRKKLPWSHXXXXXXXEAVKIFSVKC 148
           E A N NE  I  +KS +     K  +N + P  +RK+L W         E V+ FS   
Sbjct: 316 EKARNQNEKVIPLKKSRQTQAPAKKLTNLSFPHEKRKRLHWKPEEEEMLREGVQKFSTTV 375

Query: 147 RENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMVKEGYTSEEGST 13
            +NL W+ +LE+G HVF  +RTP DLKDKWRN+V +  ++  G T
Sbjct: 376 NKNLPWKKILEFGHHVFDGSRTPADLKDKWRNIVAKDSSAVNGRT 420


>emb|CBI28490.3| unnamed protein product [Vitis vinifera]
          Length = 566

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/94 (44%), Positives = 56/94 (59%)
 Frame = -1

Query: 327 ETAVNHNEDKIVSRKSVRCTRSTKYSSNPAIPDSRRKKLPWSHXXXXXXXEAVKIFSVKC 148
           + A +  ++ IVS KS++    +K  +N   P+ RRKKL W         E V+ FS   
Sbjct: 469 KNAGDGTKEVIVSSKSIQPRGPSKQLTNQIFPNERRKKLLWKTDEEEMLKEGVQKFSATG 528

Query: 147 RENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46
            +NL WR +LE+G HVF  TRTPVDLKDKWR M+
Sbjct: 529 DKNLPWRKILEFGRHVFDGTRTPVDLKDKWRKML 562


>ref|NP_195998.2| protein TRF-like 10 [Arabidopsis thaliana]
           gi|225898885|dbj|BAH30573.1| hypothetical protein
           [Arabidopsis thaliana] gi|332003270|gb|AED90653.1|
           protein TRF-like 10 [Arabidopsis thaliana]
          Length = 420

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = -1

Query: 225 RRKKLPWSHXXXXXXXEAVKIFSVKCRENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46
           +R++L W++         V+ F+ +  +N+ WR +LE G  VFHETRTP DLKDKWR+MV
Sbjct: 344 QRRRLLWTYEEEEMLKVGVEKFAAEANKNMPWRKILEMGEKVFHETRTPADLKDKWRSMV 403

Query: 45  KEGYTSEEGST 13
           K    +E+GST
Sbjct: 404 KIMNKNEQGST 414


>emb|CAB82943.1| myb-like protein [Arabidopsis thaliana] gi|9758006|dbj|BAB08603.1|
           Myb-like protein [Arabidopsis thaliana]
           gi|41619056|gb|AAS10013.1| MYB transcription factor
           [Arabidopsis thaliana]
          Length = 412

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = -1

Query: 225 RRKKLPWSHXXXXXXXEAVKIFSVKCRENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46
           +R++L W++         V+ F+ +  +N+ WR +LE G  VFHETRTP DLKDKWR+MV
Sbjct: 336 QRRRLLWTYEEEEMLKVGVEKFAAEANKNMPWRKILEMGEKVFHETRTPADLKDKWRSMV 395

Query: 45  KEGYTSEEGST 13
           K    +E+GST
Sbjct: 396 KIMNKNEQGST 406


>dbj|BAC42517.1| myb like protein [Arabidopsis thaliana]
          Length = 420

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = -1

Query: 225 RRKKLPWSHXXXXXXXEAVKIFSVKCRENLSWRNVLEYGCHVFHETRTPVDLKDKWRNMV 46
           +R++L W++         V+ F+ +  +N+ WR +LE G  VFHETRTP DLKDKWR+MV
Sbjct: 344 QRRRLLWTYEEEEMLKVGVEKFAAEANKNMPWRKILEMGEKVFHETRTPADLKDKWRSMV 403

Query: 45  KEGYTSEEGST 13
           K    +E+GST
Sbjct: 404 KIMNKNEQGST 414


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