BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029786
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33742.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   193   1e-47
ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-46
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-45

>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/113 (83%), Positives = 103/113 (91%)
 Frame = +2

Query: 2   EFLVGDLKHPKSKDIYVMLEELCSRLKADGYTPQTDLVLHDIGETEKEQSLGVHSEKLAI 181
           EFL G L HPK K+IY+MLEE+   LK+ GYTPQTD+VLHDIGETEKE+SL VHSEKLAI
Sbjct: 441 EFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAI 500

Query: 182 AFGLISTQPGTTIKIVKNLRVCSDCHTVTKLISKITGRKIVVRDRNRFHHFVD 340
           AFGLI+TQPGTTIKIVKNLRVC+DCH VTKLISKITGRKIVVRDRNRFHHFV+
Sbjct: 501 AFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVN 553


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/113 (83%), Positives = 103/113 (91%)
 Frame = +2

Query: 2   EFLVGDLKHPKSKDIYVMLEELCSRLKADGYTPQTDLVLHDIGETEKEQSLGVHSEKLAI 181
           EFL G L HPK K+IY+MLEE+   LK+ GYTPQTD+VLHDIGETEKE+SL VHSEKLAI
Sbjct: 507 EFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAI 566

Query: 182 AFGLISTQPGTTIKIVKNLRVCSDCHTVTKLISKITGRKIVVRDRNRFHHFVD 340
           AFGLI+TQPGTTIKIVKNLRVC+DCH VTKLISKITGRKIVVRDRNRFHHFV+
Sbjct: 567 AFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVN 619


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/113 (83%), Positives = 103/113 (91%)
 Frame = +2

Query: 2   EFLVGDLKHPKSKDIYVMLEELCSRLKADGYTPQTDLVLHDIGETEKEQSLGVHSEKLAI 181
           EFL G L HPK K+IY+MLEE+   LK+ GYTPQTD+VLHDIGETEKE+SL VHSEKLAI
Sbjct: 454 EFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAI 513

Query: 182 AFGLISTQPGTTIKIVKNLRVCSDCHTVTKLISKITGRKIVVRDRNRFHHFVD 340
           AFGLI+TQPGTTIKIVKNLRVC+DCH VTKLISKITGRKIVVRDRNRFHHFV+
Sbjct: 514 AFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVN 566


>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/113 (76%), Positives = 103/113 (91%)
 Frame = +2

Query: 2   EFLVGDLKHPKSKDIYVMLEELCSRLKADGYTPQTDLVLHDIGETEKEQSLGVHSEKLAI 181
           EFL GDL+HPKS++IY MLEE+   LK  GYTPQTD+VLHD+ + +KE+SLGVHSEKLA+
Sbjct: 323 EFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLAL 382

Query: 182 AFGLISTQPGTTIKIVKNLRVCSDCHTVTKLISKITGRKIVVRDRNRFHHFVD 340
           AFGLI+T+PGTTIKIVKNLRVC+DCH VTKLISKITGRK+V+RDRNRFHHFV+
Sbjct: 383 AFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNRFHHFVN 435


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/113 (79%), Positives = 102/113 (90%)
 Frame = +2

Query: 2   EFLVGDLKHPKSKDIYVMLEELCSRLKADGYTPQTDLVLHDIGETEKEQSLGVHSEKLAI 181
           EF+ G+ KHPKSK+IYVML E+ S LKA GYTPQTD+VLHD+ E +KEQSL VHSEKLAI
Sbjct: 524 EFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAI 583

Query: 182 AFGLISTQPGTTIKIVKNLRVCSDCHTVTKLISKITGRKIVVRDRNRFHHFVD 340
           AFGLIST+PGTT+KIVKNLRVCSDCHTV K+IS+ITGRKIV+RDRNRFHHF D
Sbjct: 584 AFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFED 636