BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029756
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]   187   9e-46
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]   159   2e-37
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]   158   5e-37
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   157   1e-36
gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Ja...   142   4e-32

>emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]
          Length = 1365

 Score =  187 bits (475), Expect = 9e-46
 Identities = 99/181 (54%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VLMQDC-PIAFYSHAL*GKNLLMSTYKKEMLALVLAVQKWRPYLLGRQFLVQTDQQSLKY 179
            VLMQ+   IA+++  L GK LL+STY+ E++ALVLAV+KWRPYLLGR F+V+TDQ SLKY
Sbjct: 954  VLMQEQRSIAYFNTVLKGKRLLLSTYENELMALVLAVKKWRPYLLGRHFVVRTDQCSLKY 1013

Query: 180  LWSQRIITVAQQRW*YKLMGFDFVIEYKKGKENTVADALFRRNGFAQDEKNKSELAAITH 359
            LW QRI+T  QQ+W  KLMG+D  IE+KKGK N  A+AL R++        + E  AI+ 
Sbjct: 1014 LWEQRIMTEPQQKWLLKLMGYDISIEFKKGKNNMAANALSRKD-------TQGEFNAISS 1066

Query: 360  PVPHWLEAIKEEVQTDSVLQNLIQRINDDKAVGPWKFQVGVIFFKERIYLPENSSLLKDI 539
            P+P WLE+IK E Q+   LQ + Q     +A+GPW+ + GVIFFKE IYLP NS L+  I
Sbjct: 1067 PLPQWLESIKVENQSHLELQRIHQLHKQGEAIGPWENRNGVIFFKEHIYLPSNSKLIPII 1126

Query: 540  L 542
            L
Sbjct: 1127 L 1127


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score =  159 bits (403), Expect = 2e-37
 Identities = 83/181 (45%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VLMQDCPIAFYSHAL*GKNLLMSTYKKEMLALVLAVQKWRPYLLGRQFLVQTDQQSLKYL 182
            ++ Q  P+A+ S A+ GK L +STY+KE++ALVLAV+KWR YLLG  F +QTDQQSLKYL
Sbjct: 827  LMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQQSLKYL 886

Query: 183  WSQRIITVAQQRW*YKLMGFDFVIEYKKGKENTVADALFRRNGFAQDEKNKSELAAITHP 362
              Q++ T  QQ+W  KL+G++FV+EYK+GKEN VADAL R+     +++ + +L AIT P
Sbjct: 887  LEQKMGTPLQQQWITKLLGYEFVVEYKQGKENKVADALSRK----MEDQKEGKLYAITAP 942

Query: 363  VPHWLEAIKEEVQTDSVLQNLIQRINDDK-AVGPWKFQVGVIFFKERIYLPENSSLLKDI 539
               WLE ++     D  LQ +I+ +     A   +K + G++F+K R+Y+P +  L + I
Sbjct: 943  ANTWLEQLRTSYAIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQI 1002

Query: 540  L 542
            L
Sbjct: 1003 L 1003


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score =  158 bits (400), Expect = 5e-37
 Identities = 82/181 (45%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VLMQDCPIAFYSHAL*GKNLLMSTYKKEMLALVLAVQKWRPYLLGRQFLVQTDQQSLKYL 182
            ++ Q  P+A+ S A+ GK L +STY+KE++ALVLAV+KWR YLLG  F +QTDQQSLKYL
Sbjct: 841  LMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQQSLKYL 900

Query: 183  WSQRIITVAQQRW*YKLMGFDFVIEYKKGKENTVADALFRRNGFAQDEKNKSELAAITHP 362
              +++ T  QQ+W  KL+G++FV+EYK+GKEN VADAL R+     +++ + +L AIT P
Sbjct: 901  LEEKMGTPLQQQWITKLLGYEFVVEYKQGKENKVADALSRK----MEDQKEGKLYAITAP 956

Query: 363  VPHWLEAIKEEVQTDSVLQNLIQRINDDK-AVGPWKFQVGVIFFKERIYLPENSSLLKDI 539
               WLE ++     D  LQ +I+ +     A   +K + G++F+K R+Y+P +  L + I
Sbjct: 957  ANTWLEQLRTSYAIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQI 1016

Query: 540  L 542
            L
Sbjct: 1017 L 1017


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  157 bits (397), Expect = 1e-36
 Identities = 82/181 (45%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VLMQDCPIAFYSHAL*GKNLLMSTYKKEMLALVLAVQKWRPYLLGRQFLVQTDQQSLKYL 182
            ++ Q  P+A+ S A+ GK L +STY+KE++ALVLAV+KWR YLLG  F +QTDQ SLKYL
Sbjct: 874  LMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQXSLKYL 933

Query: 183  WSQRIITVAQQRW*YKLMGFDFVIEYKKGKENTVADALFRRNGFAQDEKNKSELAAITHP 362
              Q++ T  QQ+W  KL+G++FV+EYK+GKEN VADAL R+     +++ + +L AIT P
Sbjct: 934  LEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADALSRK----MEDQKEGKLYAITAP 989

Query: 363  VPHWLEAIKEEVQTDSVLQNLIQRINDDK-AVGPWKFQVGVIFFKERIYLPENSSLLKDI 539
               WLE ++     D  LQ +I+ +     A   +K + G++F+K R+Y+P +  L + I
Sbjct: 990  ANTWLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQI 1049

Query: 540  L 542
            L
Sbjct: 1050 L 1050


>gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
            gi|108706172|gb|ABF93967.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1461

 Score =  142 bits (357), Expect = 4e-32
 Identities = 75/181 (41%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VLMQDC-PIAFYSHAL*GKNLLMSTYKKEMLALVLAVQKWRPYLLGRQFLVQTDQQSLKY 179
            VL+QD  P+AF+S  +  ++  ++ Y++E++ LVLAV+ WRPYL GR F V+TD  SLKY
Sbjct: 826  VLIQDGHPLAFFSRPVAPRHRALAAYERELIGLVLAVRHWRPYLWGRHFTVKTDHYSLKY 885

Query: 180  LWSQRIITVAQQRW*YKLMGFDFVIEYKKGKENTVADALFRRNGFAQDEKNKSELAAITH 359
            L  QR+ T+ Q  W  KL+GFDF +EYK G  NTVADAL RR     D    + +  ++ 
Sbjct: 886  LLDQRLSTIPQHHWVGKLLGFDFTVEYKPGAANTVADALSRR-----DTTEDASVLVLSA 940

Query: 360  PVPHWLEAIKEEVQTDSVLQNLIQRINDDKAVGPWKFQVGVIFFKERIYLPENSSLLKDI 539
            P   ++E +++    D  L  L   I      GPW    G++ F  R+YLP  S LL+++
Sbjct: 941  PRFDFIERLRQAQDVDPALVALQAEIRSGTRAGPWSMADGMVLFAGRLYLPPASPLLQEV 1000

Query: 540  L 542
            L
Sbjct: 1001 L 1001