BLASTX nr result

ID: Coptis24_contig00029751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029751
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263291.2| PREDICTED: leucine-rich repeat receptor-like...   109   2e-22
emb|CAN71863.1| hypothetical protein VITISV_023530 [Vitis vinifera]   109   3e-22
ref|XP_004155230.1| PREDICTED: leucine-rich repeat receptor-like...   105   4e-21
ref|XP_004150938.1| PREDICTED: leucine-rich repeat receptor-like...   105   4e-21
ref|XP_002328778.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_002263291.2| PREDICTED: leucine-rich repeat receptor-like
           serine/threonine-protein kinase BAM1-like [Vitis
           vinifera]
          Length = 976

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/102 (57%), Positives = 65/102 (63%)
 Frame = +3

Query: 3   NSNVNPAKLGQMXXXXXXXXXXXXXXXXXXXXXXXXXXXGNQFSGPIPPSIGELHQLLKL 182
           NS+  P KLG++                           GNQFSGPIPPSIGEL Q+LKL
Sbjct: 447 NSSFIPEKLGELNLSNNLLSGRLPSSLSNFTSLQILLLGGNQFSGPIPPSIGELKQVLKL 506

Query: 183 DLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVSNI 308
           DLSRN+LS EIP EIG C HL YLD+SQNNLSG IPSEVSNI
Sbjct: 507 DLSRNSLSGEIPLEIGACFHLTYLDISQNNLSGPIPSEVSNI 548



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/62 (46%), Positives = 38/62 (61%)
 Frame = +3

Query: 123 NQFSGPIPPSIGELHQLLKLDLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVS 302
           NQ SG IP  +G L  L+ LDLS N L+ EIP E+ N   L+ L+L  N L G+IP  V+
Sbjct: 268 NQLSGSIPNRLGNLTSLVNLDLSNNALTGEIPLELSNLLQLSLLNLFLNRLHGSIPDFVA 327

Query: 303 NI 308
            +
Sbjct: 328 EL 329


>emb|CAN71863.1| hypothetical protein VITISV_023530 [Vitis vinifera]
          Length = 954

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/102 (57%), Positives = 65/102 (63%)
 Frame = +3

Query: 3   NSNVNPAKLGQMXXXXXXXXXXXXXXXXXXXXXXXXXXXGNQFSGPIPPSIGELHQLLKL 182
           NS+  P KLG++                           GNQFSGPIPPSIGEL Q+LKL
Sbjct: 425 NSSSIPEKLGELNLSNNLLSGRLPSSLSNFTSLQILLLGGNQFSGPIPPSIGELKQVLKL 484

Query: 183 DLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVSNI 308
           DLSRN+LS EIP EIG C HL YLD+SQNNLSG IPSEVSNI
Sbjct: 485 DLSRNSLSGEIPLEIGACFHLTYLDISQNNLSGPIPSEVSNI 526



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/62 (46%), Positives = 38/62 (61%)
 Frame = +3

Query: 123 NQFSGPIPPSIGELHQLLKLDLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVS 302
           NQ SG IP  +G L  L+ LDLS N L+ EIP E+ N   L+ L+L  N L G+IP  V+
Sbjct: 246 NQLSGSIPNRLGNLTSLVNLDLSNNALTGEIPLELSNLLQLSLLNLFLNRLHGSIPDFVA 305

Query: 303 NI 308
            +
Sbjct: 306 EL 307


>ref|XP_004155230.1| PREDICTED: leucine-rich repeat receptor-like
           serine/threonine-protein kinase BAM1-like [Cucumis
           sativus]
          Length = 998

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/96 (58%), Positives = 61/96 (63%)
 Frame = +3

Query: 18  PAKLGQMXXXXXXXXXXXXXXXXXXXXXXXXXXXGNQFSGPIPPSIGELHQLLKLDLSRN 197
           P KLGQ+                           GNQFSG IPPSIGEL+QLLKLDLSRN
Sbjct: 449 PIKLGQLNLSNNLLSGTLPSSLSNLSSLQILLLNGNQFSGTIPPSIGELNQLLKLDLSRN 508

Query: 198 TLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVSN 305
           +LS EIP EIGNC HL YLDLS+NNLSG IP E+SN
Sbjct: 509 SLSGEIPPEIGNCIHLTYLDLSRNNLSGPIPPEISN 544



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = +3

Query: 123 NQFSGPIPPSIGELHQLLKLDLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEV 299
           N  SG IPP IG    L  LDLSRN LS  IP EI N   L YL+LS+N+L+ ++P  +
Sbjct: 508 NSLSGEIPPEIGNCIHLTYLDLSRNNLSGPIPPEISNAHILNYLNLSRNHLNQSLPKSL 566


>ref|XP_004150938.1| PREDICTED: leucine-rich repeat receptor-like
           serine/threonine-protein kinase BAM1-like [Cucumis
           sativus]
          Length = 999

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/96 (58%), Positives = 61/96 (63%)
 Frame = +3

Query: 18  PAKLGQMXXXXXXXXXXXXXXXXXXXXXXXXXXXGNQFSGPIPPSIGELHQLLKLDLSRN 197
           P KLGQ+                           GNQFSG IPPSIGEL+QLLKLDLSRN
Sbjct: 449 PIKLGQLNLSNNLLSGTLPSSLSNLSSLQILLLNGNQFSGTIPPSIGELNQLLKLDLSRN 508

Query: 198 TLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVSN 305
           +LS EIP EIGNC HL YLDLS+NNLSG IP E+SN
Sbjct: 509 SLSGEIPPEIGNCIHLTYLDLSRNNLSGPIPPEISN 544



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = +3

Query: 123 NQFSGPIPPSIGELHQLLKLDLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEV 299
           N  SG IPP IG    L  LDLSRN LS  IP EI N   L YL+LS+N+L+ ++P  +
Sbjct: 508 NSLSGEIPPEIGNCIHLTYLDLSRNNLSGPIPPEISNAHILNYLNLSRNHLNQSLPKSL 566


>ref|XP_002328778.1| predicted protein [Populus trichocarpa] gi|222839076|gb|EEE77427.1|
           predicted protein [Populus trichocarpa]
          Length = 1001

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/102 (51%), Positives = 64/102 (62%)
 Frame = +3

Query: 3   NSNVNPAKLGQMXXXXXXXXXXXXXXXXXXXXXXXXXXXGNQFSGPIPPSIGELHQLLKL 182
           NS++ P KLGQ+                           GN+FSGPIPP IGEL Q+LKL
Sbjct: 444 NSSLKPVKLGQLDLSNNLFSGPLPSSLSNFSSLQTLLLSGNKFSGPIPPMIGELLQVLKL 503

Query: 183 DLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVSNI 308
           DLSRN+ S  +P EIGNC HL +LD+SQNNLSG IPS++SNI
Sbjct: 504 DLSRNSFSGPVPPEIGNCFHLTFLDMSQNNLSGPIPSDMSNI 545



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +3

Query: 123 NQFSGPIPPSIGELHQLLKLDLSRNTLSYEIPAEIGNCSHLAYLDLSQNNLSGAIPSEVS 302
           N FSGP+PP IG    L  LD+S+N LS  IP+++ N  +L YL+LS+N+L+  IP  + 
Sbjct: 508 NSFSGPVPPEIGNCFHLTFLDMSQNNLSGPIPSDMSNIRNLNYLNLSRNHLNQTIPKSLG 567

Query: 303 NI 308
           ++
Sbjct: 568 SL 569


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