BLASTX nr result

ID: Coptis24_contig00029747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029747
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...    59   5e-07
ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    58   7e-07
ref|XP_002529304.1| Desacetoxyvindoline 4-hydroxylase, putative ...    57   1e-06
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    55   5e-06

>ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Glycine max]
          Length = 374

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -2

Query: 206 VSVACFLTRRFDMAATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAF 30
           VSVACF T  F  +   YGPIKEL++    PVY E S K+++ +  ++GLDG S LD F
Sbjct: 312 VSVACFFTIHFYPSTRIYGPIKELLSEEXPPVYRETSLKDFIAYYYNKGLDGNSALDHF 370


>ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Glycine max]
          Length = 369

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = -2

Query: 206 VSVACFLTRRFDMAATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAF 30
           VSVACF T         YGPIKEL++  + PVY E S K+++ + +++GLDG S LD F
Sbjct: 307 VSVACFFTLHLYPTTRIYGPIKELLSEEKPPVYRETSLKDFIAYYDNKGLDGNSALDHF 365


>ref|XP_002529304.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
           gi|223531228|gb|EEF33073.1| Desacetoxyvindoline
           4-hydroxylase, putative [Ricinus communis]
          Length = 363

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/60 (46%), Positives = 37/60 (61%)
 Frame = -2

Query: 206 VSVACFLTRRFDMAATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 27
           VSVACF +      +  YGPIKEL++    P Y E + KE++ H N++GLDG S L  FK
Sbjct: 303 VSVACFFSTALFPVSRLYGPIKELLSEENPPKYRETTVKEFVSHFNAKGLDGTSALLHFK 362


>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 36/60 (60%)
 Frame = -2

Query: 206 VSVACFLTRRFDMAATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 27
           +SVACF +  F  ++  YGPIKEL++    P+Y E +  EYL +    GLDG S L  FK
Sbjct: 319 ISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYLSYFYDHGLDGTSPLIHFK 378


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -2

Query: 206 VSVACFLTRRFDMAATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 27
           VSVACF +     +   YGPIKEL++    P Y EI+ ++++ + N++GLDG S L+ FK
Sbjct: 613 VSVACFFSTALLPSLKLYGPIKELLSEENPPKYREITVRDFVAYFNAKGLDGTSALEHFK 672


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