BLASTX nr result

ID: Coptis24_contig00029742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029742
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransgluc...   240   1e-61
gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium ...   232   3e-59
ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|2...   229   3e-58
gb|ABM91064.1| xyloglucan endotransglycosylase/hydrolase precurs...   228   4e-58
gb|AFK40151.1| unknown [Medicago truncatula]                          224   1e-56

>ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 33 [Vitis vinifera] gi|296086546|emb|CBI32135.3|
           unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  240 bits (612), Expect = 1e-61
 Identities = 108/165 (65%), Positives = 133/165 (80%)
 Frame = +2

Query: 2   SIKTGREEKFHLWFDPTEQHHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMS 181
           S+ TGREEKF LWFDPTEQ+H YS IWN +H VFLVDNVP+RE+ +++ ISS YP KPMS
Sbjct: 148 SVSTGREEKFRLWFDPTEQYHHYSFIWNRHHIVFLVDNVPVREILYNDAISSVYPSKPMS 207

Query: 182 LHCTIWDGSEWATNGGKDPVNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSIL 361
           ++ TIWDGSEWAT+GGK PV+YKYAPFV SFG+M+M+GC +D  K+   C K    +S  
Sbjct: 208 VYATIWDGSEWATHGGKYPVDYKYAPFVVSFGEMEMDGCTFDPKKKGVSCSKG--SVSSR 265

Query: 362 DPVEGEEFAKLSQEQKMGMDDYRKRFMIYSYCKDPRRYKVLPPEC 496
           DPV+GEEFAKLS++Q+MGM+  RK+ M YSYCKD  R+KVLPPEC
Sbjct: 266 DPVDGEEFAKLSEQQRMGMEWARKKLMFYSYCKDSSRFKVLPPEC 310


>gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium graveolens]
          Length = 307

 Score =  232 bits (592), Expect = 3e-59
 Identities = 109/167 (65%), Positives = 129/167 (77%)
 Frame = +2

Query: 2   SIKTGREEKFHLWFDPTEQHHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMS 181
           S KTGREEKF+LWFDPT + HQYSI+WN++HTVFLVDNVP+REV H+  I+SAYP KPMS
Sbjct: 143 STKTGREEKFYLWFDPTIESHQYSILWNNHHTVFLVDNVPVREVVHNAAIASAYPSKPMS 202

Query: 182 LHCTIWDGSEWATNGGKDPVNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSIL 361
           ++ TIWD SEWAT+GGK  VNYKYAPFVAS G ++M GC   +      CV    G S L
Sbjct: 203 VYATIWDASEWATHGGKYAVNYKYAPFVASLGQIEMGGCIKQRADSTQSCV---TGPSTL 259

Query: 362 DPVEGEEFAKLSQEQKMGMDDYRKRFMIYSYCKDPRRYKVLPPECNR 502
           DPVEG+EFAKLS++Q  GMD  R++ M YSYCKD  RYKVLP ECN+
Sbjct: 260 DPVEGQEFAKLSKQQTTGMDWARRKHMFYSYCKDTSRYKVLPAECNK 306


>ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|222861041|gb|EEE98583.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  229 bits (583), Expect = 3e-58
 Identities = 105/165 (63%), Positives = 124/165 (75%)
 Frame = +2

Query: 2   SIKTGREEKFHLWFDPTEQHHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMS 181
           S  TGREEKF+LWFDPTEQHH YSIIWNS+H VFLVDNVP+RE  HS    S YP KPMS
Sbjct: 149 STGTGREEKFYLWFDPTEQHHHYSIIWNSHHIVFLVDNVPVREFAHSSSYPSVYPSKPMS 208

Query: 182 LHCTIWDGSEWATNGGKDPVNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSIL 361
           L+ TIWDGS+WAT+GGK PVNYKYAPFV SF +M+M GC +++T  V  C K+    S L
Sbjct: 209 LYATIWDGSQWATHGGKYPVNYKYAPFVVSFAEMEMTGCIFNQTALVTSCSKANP--SSL 266

Query: 362 DPVEGEEFAKLSQEQKMGMDDYRKRFMIYSYCKDPRRYKVLPPEC 496
           DPV+G EF +LS EQ + MD  R++ M YSYC D  R+K +PPEC
Sbjct: 267 DPVDGPEFVRLSNEQSVAMDWARRKLMFYSYCNDRSRFKAMPPEC 311


>gb|ABM91064.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-38 [Populus
           tremula x Populus tremuloides]
          Length = 312

 Score =  228 bits (582), Expect = 4e-58
 Identities = 106/165 (64%), Positives = 125/165 (75%)
 Frame = +2

Query: 2   SIKTGREEKFHLWFDPTEQHHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMS 181
           S  TGREEKF+LWFDPTEQHH YSIIWNS+H VFLVDNVP+RE  HS    S YP KPMS
Sbjct: 149 STGTGREEKFYLWFDPTEQHHHYSIIWNSHHIVFLVDNVPVREFAHSSSYPSVYPSKPMS 208

Query: 182 LHCTIWDGSEWATNGGKDPVNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSIL 361
           L+ TIWDGS+WAT+GGK PVNYKYAPFV SF +M+M GC +++T  V  C K+    S L
Sbjct: 209 LYATIWDGSQWATHGGKYPVNYKYAPFVVSFAEMEMTGCIFNQTAIVTSCSKANP--SSL 266

Query: 362 DPVEGEEFAKLSQEQKMGMDDYRKRFMIYSYCKDPRRYKVLPPEC 496
           DPV+G EFA+LS+EQ   MD  R++ M YSYC D  R+K +PPEC
Sbjct: 267 DPVDGPEFARLSKEQSAAMDWARRKLMFYSYCNDRSRFKGMPPEC 311


>gb|AFK40151.1| unknown [Medicago truncatula]
          Length = 311

 Score =  224 bits (570), Expect = 1e-56
 Identities = 104/165 (63%), Positives = 121/165 (73%)
 Frame = +2

Query: 2   SIKTGREEKFHLWFDPTEQHHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMS 181
           S++TGREEKF+LWFDPT+QHH YSI+WNS HTVF VDN+P+RE  H    S  YPLKPMS
Sbjct: 148 SVRTGREEKFYLWFDPTQQHHYYSILWNSYHTVFFVDNIPVREFIHKNTPSFIYPLKPMS 207

Query: 182 LHCTIWDGSEWATNGGKDPVNYKYAPFVASFGDMQMEGCKWDKTKQVPFCVKSGQGLSIL 361
           L+ TIWDGSEWAT+GGK PVNYKY PFV S  +M++ GC  D    +  C KS    S L
Sbjct: 208 LYATIWDGSEWATHGGKYPVNYKYGPFVVSLAEMELSGCINDPKSPISSCSKSNP--SGL 265

Query: 362 DPVEGEEFAKLSQEQKMGMDDYRKRFMIYSYCKDPRRYKVLPPEC 496
           DPV+G EF KLSQ+Q   MD  R++ M YSYC D  RYKVLPPEC
Sbjct: 266 DPVDGAEFIKLSQQQIGAMDWARRKLMFYSYCNDRTRYKVLPPEC 310


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