BLASTX nr result

ID: Coptis24_contig00029729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029729
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22180.3| unnamed protein product [Vitis vinifera]               95   2e-17
ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vini...    95   2e-17
emb|CBI32075.3| unnamed protein product [Vitis vinifera]               94   5e-17
ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|2...    87   4e-15
gb|AAC00575.1| Hypothetical protein [Arabidopsis thaliana]             79   2e-12

>emb|CBI22180.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 75/231 (32%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
 Frame = -3

Query: 760 MVTMFQIWFLLSVFF---FYVLPFISSQSNYPQNIETFFPLDSTTPPGNSPFSPPIDQSR 590
           M  + Q   L+S+FF   F +L   S Q N P+NIETF+P      P N   +P I Q  
Sbjct: 1   MAAVIQPCPLISLFFVSLFSILHLSSCQPNSPRNIETFYPFRPPPNPTNPIPNPRISQLS 60

Query: 589 QPTISQGTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXXXXXXQNNER 410
            P+    +                                               +N   
Sbjct: 61  IPSSKSSSSYAVAKAVAVTAATTIVVSGLFFILFQKYTVARGRSQKGKNDPRGGGEN--- 117

Query: 409 IEIVPHREFKEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLSRPIGEYX 230
             +V H EF      F+G L GLIVDE GLD+LYW+KLE    K SF K+ L     E  
Sbjct: 118 --VVSHIEFSR----FNGNLNGLIVDENGLDVLYWKKLEGDYRKNSFPKQALHNLKHEEK 171

Query: 229 XXXXXXXXXXXSIPIQEVPLLRGKSSNSSAQIRHEVEELNQISGLPWTSRT 77
                      S PIQE+PLLRGKSS S  +++ EVE LN  S  P +S++
Sbjct: 172 RMSRNGDGRAKSEPIQEIPLLRGKSSTSYDEVQEEVENLNWFSAPPPSSQS 222


>ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vinifera]
          Length = 819

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 75/231 (32%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
 Frame = -3

Query: 760 MVTMFQIWFLLSVFF---FYVLPFISSQSNYPQNIETFFPLDSTTPPGNSPFSPPIDQSR 590
           M  + Q   L+S+FF   F +L   S Q N P+NIETF+P      P N   +P I Q  
Sbjct: 1   MAAVIQPCPLISLFFVSLFSILHLSSCQPNSPRNIETFYPFRPPPNPTNPIPNPRISQLS 60

Query: 589 QPTISQGTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXXXXXXQNNER 410
            P+    +                                               +N   
Sbjct: 61  IPSSKSSSSYAVAKAVAVTAATTIVVSGLFFILFQKYTVARGRSQKGKNDPRGGGEN--- 117

Query: 409 IEIVPHREFKEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLSRPIGEYX 230
             +V H EF      F+G L GLIVDE GLD+LYW+KLE    K SF K+ L     E  
Sbjct: 118 --VVSHIEFSR----FNGNLNGLIVDENGLDVLYWKKLEGDYRKNSFPKQALHNLKHEEK 171

Query: 229 XXXXXXXXXXXSIPIQEVPLLRGKSSNSSAQIRHEVEELNQISGLPWTSRT 77
                      S PIQE+PLLRGKSS S  +++ EVE LN  S  P +S++
Sbjct: 172 RMSRNGDGRAKSEPIQEIPLLRGKSSTSYDEVQEEVENLNWFSAPPPSSQS 222


>emb|CBI32075.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 50/100 (50%), Positives = 61/100 (61%)
 Frame = -3

Query: 376 EFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLSRPIGEYXXXXXXXXXXXX 197
           EF  F+G LKGLIVDE GLD+LYW++LE G  K SFRKE L     E             
Sbjct: 110 EFSRFNGNLKGLIVDENGLDVLYWKQLEGGSRKNSFRKEALHNLKDEEKRMSRNGDQRAK 169

Query: 196 SIPIQEVPLLRGKSSNSSAQIRHEVEELNQISGLPWTSRT 77
             PIQE+PLLRGKSS S  +++ EVE LN+ S  P  S++
Sbjct: 170 PEPIQEIPLLRGKSSTSYDEVQEEVENLNRFSAPPPLSQS 209


>ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|222852588|gb|EEE90135.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 75/218 (34%), Positives = 92/218 (42%), Gaps = 9/218 (4%)
 Frame = -3

Query: 760 MVTMFQIWFLLSVFFFY-VLPFISSQSNYPQNIETF--FPLDSTTPPGNSPFSPPIDQ-S 593
           M  + Q W +L + FF  V+PF SSQS   QNIETF  FP+ S  PP  SP  PP    S
Sbjct: 1   MAVIKQPWLVLHLMFFLSVIPFSSSQSISAQNIETFYPFPIPSPAPPLPSPAPPPKPSTS 60

Query: 592 RQPTI---SQGTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXXXXXXQ 422
             PTI   S   PL                              +               
Sbjct: 61  PSPTILSPSAPGPLPSSSSNKNVVKAVAATAASTFVVATLLFFLIQRFVILPRRKSNGHG 120

Query: 421 NNER--IEIVPHREFKEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLSR 248
              R    +VP      +F   +G +KGL+VDE GLD+LYWRKLE+   K SF +E   R
Sbjct: 121 AGSRGGQAVVPLPLPPSQFSRIEGNVKGLVVDENGLDVLYWRKLEEEDKKNSFVREERRR 180

Query: 247 PIGEYXXXXXXXXXXXXSIPIQEVPLLRGKSSNSSAQI 134
                            S PIQE+PLLRGKSS S  ++
Sbjct: 181 --------------NSKSEPIQEIPLLRGKSSTSEKKV 204


>gb|AAC00575.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 820

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 70/212 (33%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
 Frame = -3

Query: 736 FLLSVFFFYVLPFISSQSNYPQNIETFFPLDSTTPPGNSP-FSPPIDQSRQPTIS-QGTP 563
           FL  + FF    F  SQS+ P+NIETFFP D+ TPP  SP  SPP + S   + S +G  
Sbjct: 15  FLTLILFFPNQSF--SQSDSPRNIETFFPNDTITPPVQSPVLSPPQNPSSSSSDSDRGNI 72

Query: 562 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXXXXXXQNNERIEIVPHREF 383
           L                              V               N  +  + P  E 
Sbjct: 73  LRAVLITAASTLLVAAVFFFLVHKCRRRRNRVGGVD-----------NTLQPPVPPLAEA 121

Query: 382 ---KEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKT---SFRKEVLSRPIGEYXXXX 221
              +E F  F G +KGLI+DE GLD+LYWRKL+  Q      SFRKE++     E     
Sbjct: 122 ALAREGFTRFGGNVKGLILDENGLDVLYWRKLQQSQRDNKGGSFRKEIIHGDDEEKNVIY 181

Query: 220 XXXXXXXXSIPIQEVPLLRGKSSNSSAQIRHE 125
                     P+ E PLLRG+SS S + I ++
Sbjct: 182 SKSKKKSG--PVTETPLLRGRSSTSHSVIHND 211


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