BLASTX nr result

ID: Coptis24_contig00029726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029726
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533569.1| PREDICTED: uncharacterized protein LOC100804...   104   7e-21
ref|NP_001241494.1| uncharacterized protein LOC100810725 [Glycin...   103   2e-20
ref|XP_002327875.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002327874.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_003551703.1| PREDICTED: uncharacterized protein LOC100810...    92   4e-17

>ref|XP_003533569.1| PREDICTED: uncharacterized protein LOC100804626 [Glycine max]
          Length = 196

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/123 (43%), Positives = 79/123 (64%)
 Frame = -3

Query: 377 MASYGTMHNRSTSSSTSAHMDHHSKVLEGLKEKVHRGYSFLRFFGFPSSSETAAVRIIRN 198
           MA+YGT     +SS+  +  D++    +  +EK +  +        PS+SE A VRI+RN
Sbjct: 1   MANYGTTQRIPSSSTPPSTADNYEPEPKAPQEKFYSDFRIYCPINIPSTSEAAGVRIMRN 60

Query: 197 LQYFRQYYILVVWGILFVSLVPKRRISLIFLIGMTVVAYLYQLLLRLIPNSIILQKIVDK 18
           +  F  YY L VW ILF++L+P+R++SLI  + MT V  LY LLLR+ PNS++L +I+DK
Sbjct: 61  MCNFGLYYTLFVWIILFITLIPQRKVSLILFVTMTYVTTLYILLLRVFPNSVVLHRIIDK 120

Query: 17  RLV 9
           R+V
Sbjct: 121 RVV 123


>ref|NP_001241494.1| uncharacterized protein LOC100810725 [Glycine max]
           gi|255647249|gb|ACU24092.1| unknown [Glycine max]
          Length = 196

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/123 (43%), Positives = 76/123 (61%)
 Frame = -3

Query: 377 MASYGTMHNRSTSSSTSAHMDHHSKVLEGLKEKVHRGYSFLRFFGFPSSSETAAVRIIRN 198
           MA+YGT     TSS+  +  D +    +   EK +  +        PS+SE A VRI+RN
Sbjct: 1   MANYGTTQRIPTSSTPQSTADTYEPEPKAPHEKFYSDFRIYCPINIPSTSEAAGVRIMRN 60

Query: 197 LQYFRQYYILVVWGILFVSLVPKRRISLIFLIGMTVVAYLYQLLLRLIPNSIILQKIVDK 18
           +  F  YY L VW ILF++L+P+R++SLI  + MT V  LY LLLR  PNS++L +I+DK
Sbjct: 61  MCNFGLYYTLFVWIILFITLIPQRKVSLILFVIMTYVTTLYFLLLRAFPNSVVLHRIIDK 120

Query: 17  RLV 9
           R+V
Sbjct: 121 RVV 123


>ref|XP_002327875.1| predicted protein [Populus trichocarpa] gi|222837284|gb|EEE75663.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
 Frame = -3

Query: 377 MASYGTMHNRSTSSSTSAHMDHHSKVLEGLKEKVHRGYSFLRFFGFPSSSETAAVRIIRN 198
           MA +GT+   ST S  +   D      +   +     +  +  F  PSS E A++RIIRN
Sbjct: 1   MAGHGTIQRPSTMSPPTTPTDPEDSTGKNRDDFERPEFRLVCPFSIPSSPEAASLRIIRN 60

Query: 197 LQYFRQYYILVVWGILFVSLVPKRRISLIFLIGMTVVAYLYQLLLR-LIPNSIILQKIVD 21
           L +F  YY   VW +LF++L+P+R++SLIFL+ MT VA LY LLLR L PN  +L KI+D
Sbjct: 61  LGHFALYYTHFVWIVLFIALIPERKVSLIFLVIMTYVASLYLLLLRALPPNFYLLDKIID 120

Query: 20  KRLV 9
           K +V
Sbjct: 121 KSIV 124


>ref|XP_002327874.1| predicted protein [Populus trichocarpa] gi|222837283|gb|EEE75662.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
 Frame = -3

Query: 377 MASYGTMHNRSTSSSTSAHMDHHSKVLEGLKEKVHRGYSFLRFFGFPSSSETAAVRIIRN 198
           MA +GT+   ST S  +   D      +   +     +  +  F  PSS E A++RIIRN
Sbjct: 1   MAGHGTIQRPSTMSPPTTPTDPEDSTGKNRDDFERPEFRLVCPFSIPSSPEAASLRIIRN 60

Query: 197 LQYFRQYYILVVWGILFVSLVPKRRISLIFLIGMTVVAYLYQLLLR-LIPNSIILQKIVD 21
           L +F  YY   VW +LF++L+P+R++SLIFL+ MT VA LY LLLR L PN  +L KI+D
Sbjct: 61  LGHFALYYTHFVWIVLFIALIPERKVSLIFLVIMTYVASLYLLLLRALPPNFYLLDKIID 120

Query: 20  KRLV 9
           K +V
Sbjct: 121 KSIV 124


>ref|XP_003551703.1| PREDICTED: uncharacterized protein LOC100810863 [Glycine max]
          Length = 198

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/123 (39%), Positives = 73/123 (59%)
 Frame = -3

Query: 377 MASYGTMHNRSTSSSTSAHMDHHSKVLEGLKEKVHRGYSFLRFFGFPSSSETAAVRIIRN 198
           MA++GT      +++T +         +G  EK++  +     F  P +SE AA+R+IRN
Sbjct: 1   MANFGTTQRTPNTTTTPSPPSLDPYEPKGPHEKLYTDFKIYWPFTMPLTSEAAAIRVIRN 60

Query: 197 LQYFRQYYILVVWGILFVSLVPKRRISLIFLIGMTVVAYLYQLLLRLIPNSIILQKIVDK 18
           L++   YY L VW ILF+ L+P R++SLI L+ MT V  +Y L+LR  P SI L + +DK
Sbjct: 61  LEHLGLYYTLFVWIILFIVLIPHRKLSLIILVIMTYVIVIYCLVLRAYPKSIFLHRTIDK 120

Query: 17  RLV 9
           + V
Sbjct: 121 KFV 123


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