BLASTX nr result

ID: Coptis24_contig00029723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029723
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272061.2| PREDICTED: uncharacterized protein LOC100249...   442   e-122
emb|CBI27461.3| unnamed protein product [Vitis vinifera]              442   e-122
ref|XP_002312240.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002515796.1| conserved hypothetical protein [Ricinus comm...   370   e-100
ref|XP_003537783.1| PREDICTED: uncharacterized protein LOC100789...   360   2e-97

>ref|XP_002272061.2| PREDICTED: uncharacterized protein LOC100249600 [Vitis vinifera]
          Length = 1099

 Score =  442 bits (1138), Expect = e-122
 Identities = 223/329 (67%), Positives = 268/329 (81%), Gaps = 4/329 (1%)
 Frame = -2

Query: 977  LELLTQFVIAIVKKHGPDTGLKSWSQGNKVLGICRTMLTHHHTSRVFLVLSRLLAFTCLY 798
            LELLT+F++++V+KHGPDTGLKSWS G+KVLGICRT++ HHH+SR+FL LSRLLAFTCLY
Sbjct: 534  LELLTKFIVSLVEKHGPDTGLKSWSLGSKVLGICRTLMIHHHSSRLFLGLSRLLAFTCLY 593

Query: 797  FPDLEVRDNARIYLRMLVCIPGRKLRHILNHEEQLPGKSPSSHTNSFHDTQ---PSQDFK 627
            FPDLEVRDNARIYLRML+CIPG+KLRHILN   QLPG +PS HT+SF + Q   PS+D K
Sbjct: 594  FPDLEVRDNARIYLRMLICIPGKKLRHILNLRAQLPGIAPSPHTSSFFNVQSPRPSRDLK 653

Query: 626  KSRNLSTYIHLERVIELLVKQSWTLSISTLDIKSSKNDCFEGINDSEACVLVETDVDESS 447
            KSRN+S+YIHLERVI LLVKQSW+LS+ TL I   K    E I DSE  V +E +VD SS
Sbjct: 654  KSRNISSYIHLERVIPLLVKQSWSLSLPTLGIGGDKPGYLENIMDSEPPVDMEREVDGSS 713

Query: 446  DIHV-SESDRIDSSQEPLRVMDSKASEILGILRRHFICIPDFRYMPGFKIKILCTLRFES 270
             I + SE+++ID  QEPLRVMDSK SEILGILRRHF CIPDFR+MPG KI+I C+LRF+S
Sbjct: 714  SIQIISETEKIDHPQEPLRVMDSKISEILGILRRHFSCIPDFRHMPGLKIRISCSLRFKS 773

Query: 269  EPFNHIWGVKSTANNLDGCDHLPAIYATVLTFSSTSPYGSIPSRRIPFLLGDALRDANAS 90
            EPFN +WG    A +LDG D LPAIYATVLTFSS++PYGSIPS  IPFLLG+   +  +S
Sbjct: 774  EPFNRVWGADVPAADLDGVDALPAIYATVLTFSSSAPYGSIPSFHIPFLLGEPPTNGYSS 833

Query: 89   GQIGNLDVIPLGAVSERQDSFRARVVIEL 3
            GQ G+LD++P+   SE ++SFRA V+IEL
Sbjct: 834  GQKGSLDIVPVENGSEEEESFRAPVMIEL 862


>emb|CBI27461.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  442 bits (1138), Expect = e-122
 Identities = 223/329 (67%), Positives = 268/329 (81%), Gaps = 4/329 (1%)
 Frame = -2

Query: 977  LELLTQFVIAIVKKHGPDTGLKSWSQGNKVLGICRTMLTHHHTSRVFLVLSRLLAFTCLY 798
            LELLT+F++++V+KHGPDTGLKSWS G+KVLGICRT++ HHH+SR+FL LSRLLAFTCLY
Sbjct: 560  LELLTKFIVSLVEKHGPDTGLKSWSLGSKVLGICRTLMIHHHSSRLFLGLSRLLAFTCLY 619

Query: 797  FPDLEVRDNARIYLRMLVCIPGRKLRHILNHEEQLPGKSPSSHTNSFHDTQ---PSQDFK 627
            FPDLEVRDNARIYLRML+CIPG+KLRHILN   QLPG +PS HT+SF + Q   PS+D K
Sbjct: 620  FPDLEVRDNARIYLRMLICIPGKKLRHILNLRAQLPGIAPSPHTSSFFNVQSPRPSRDLK 679

Query: 626  KSRNLSTYIHLERVIELLVKQSWTLSISTLDIKSSKNDCFEGINDSEACVLVETDVDESS 447
            KSRN+S+YIHLERVI LLVKQSW+LS+ TL I   K    E I DSE  V +E +VD SS
Sbjct: 680  KSRNISSYIHLERVIPLLVKQSWSLSLPTLGIGGDKPGYLENIMDSEPPVDMEREVDGSS 739

Query: 446  DIHV-SESDRIDSSQEPLRVMDSKASEILGILRRHFICIPDFRYMPGFKIKILCTLRFES 270
             I + SE+++ID  QEPLRVMDSK SEILGILRRHF CIPDFR+MPG KI+I C+LRF+S
Sbjct: 740  SIQIISETEKIDHPQEPLRVMDSKISEILGILRRHFSCIPDFRHMPGLKIRISCSLRFKS 799

Query: 269  EPFNHIWGVKSTANNLDGCDHLPAIYATVLTFSSTSPYGSIPSRRIPFLLGDALRDANAS 90
            EPFN +WG    A +LDG D LPAIYATVLTFSS++PYGSIPS  IPFLLG+   +  +S
Sbjct: 800  EPFNRVWGADVPAADLDGVDALPAIYATVLTFSSSAPYGSIPSFHIPFLLGEPPTNGYSS 859

Query: 89   GQIGNLDVIPLGAVSERQDSFRARVVIEL 3
            GQ G+LD++P+   SE ++SFRA V+IEL
Sbjct: 860  GQKGSLDIVPVENGSEEEESFRAPVMIEL 888


>ref|XP_002312240.1| predicted protein [Populus trichocarpa] gi|222852060|gb|EEE89607.1|
            predicted protein [Populus trichocarpa]
          Length = 1126

 Score =  399 bits (1024), Expect = e-109
 Identities = 208/329 (63%), Positives = 251/329 (76%), Gaps = 4/329 (1%)
 Frame = -2

Query: 977  LELLTQFVIAIVKKHGPDTGLKSWSQGNKVLGICRTMLTHHHTSRVFLVLSRLLAFTCLY 798
            L+LL +F++ +V+KHGPDTGLK+WS+G+KVLGICRTML HHH+SR+FL LSRLLAFTCLY
Sbjct: 563  LDLLDKFMVFLVEKHGPDTGLKTWSRGSKVLGICRTMLMHHHSSRLFLGLSRLLAFTCLY 622

Query: 797  FPDLEVRDNARIYLRMLVCIPGRKLRHILNHEEQLPGKSPSSHTNSFHDT----QPSQDF 630
            FPDLEVRDNARIYLRML+CIPG KLR ILN  EQL G SPSSH++SF +     Q  Q+ 
Sbjct: 623  FPDLEVRDNARIYLRMLICIPGVKLRDILNLGEQL-GNSPSSHSSSFFNVHSPRQHYQNL 681

Query: 629  KKSRNLSTYIHLERVIELLVKQSWTLSISTLDIKSSKNDCFEGINDSEACVLVETDVDES 450
            KKSRN+S YIH+ER   LLVKQ+W+LS+  L   S+K    E I DSE  V V       
Sbjct: 682  KKSRNISAYIHIERTKPLLVKQTWSLSLLPLGDGSAKAGYLESIRDSEPLVDVRDLNGNE 741

Query: 449  SDIHVSESDRIDSSQEPLRVMDSKASEILGILRRHFICIPDFRYMPGFKIKILCTLRFES 270
            + +   E++RI  SQEPLRVMDSK SEIL ILRRHF CIPDFR+MPGFK++I C LRFES
Sbjct: 742  NLLTAPENERIYQSQEPLRVMDSKISEILEILRRHFSCIPDFRHMPGFKVRISCHLRFES 801

Query: 269  EPFNHIWGVKSTANNLDGCDHLPAIYATVLTFSSTSPYGSIPSRRIPFLLGDALRDANAS 90
            EPFNHIWG  S  + LDG D LPAIYATVL FSS++PYGSIPS RIP LLG+  R+ + S
Sbjct: 802  EPFNHIWGDNSPTSQLDGVDGLPAIYATVLKFSSSAPYGSIPSYRIPCLLGEPPRNDDIS 861

Query: 89   GQIGNLDVIPLGAVSERQDSFRARVVIEL 3
            GQ  +LD++P+   +  ++SFRA V I+L
Sbjct: 862  GQSVSLDIVPIENGAREEESFRAPVTIDL 890


>ref|XP_002515796.1| conserved hypothetical protein [Ricinus communis]
            gi|223545065|gb|EEF46577.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1113

 Score =  370 bits (950), Expect = e-100
 Identities = 196/329 (59%), Positives = 248/329 (75%), Gaps = 4/329 (1%)
 Frame = -2

Query: 977  LELLTQFVIAIVKKHGPDTGLKSWSQGNKVLGICRTMLTHHHTSRVFLVLSRLLAFTCLY 798
            L+LLT+F++ +V+KHGPDTGLKSWSQG+KVL I RTM+ HH +SR+FL LSRL AFTCLY
Sbjct: 549  LDLLTKFMVFLVEKHGPDTGLKSWSQGSKVLCISRTMMMHHCSSRLFLGLSRLFAFTCLY 608

Query: 797  FPDLEVRDNARIYLRMLVCIPGRKLRHILNHEEQLPGKSPSSHTNSFHDT---QPSQDFK 627
            FPDLEVRDNARIYLRML+CIPG KL+ IL+  EQL   SPS+H++SF +    Q  Q FK
Sbjct: 609  FPDLEVRDNARIYLRMLICIPGVKLKGILSLGEQLLSISPSTHSSSFFNILSPQHYQSFK 668

Query: 626  KSRNLSTYIHLERVIELLVKQSWTLSISTLDIKSSKNDCFEGINDSEACVLV-ETDVDES 450
            KSR++S+ IH+ERV+ LLVKQSW+LS+S LDI  SK    E + DSE  V + E DV  +
Sbjct: 669  KSRSISSCIHVERVVPLLVKQSWSLSLSPLDIGCSKPTFLESVTDSEPQVDIGELDVS-T 727

Query: 449  SDIHVSESDRIDSSQEPLRVMDSKASEILGILRRHFICIPDFRYMPGFKIKILCTLRFES 270
            + +  ++++R +  QEPLRVMDSK SEILGILRRHF CIPDFR MPG K+ I CTLR ES
Sbjct: 728  NFLATTKTERTNQLQEPLRVMDSKISEILGILRRHFSCIPDFRRMPGLKVSISCTLRLES 787

Query: 269  EPFNHIWGVKSTANNLDGCDHLPAIYATVLTFSSTSPYGSIPSRRIPFLLGDALRDANAS 90
            EPF H+WG  S  + L+G D LPA+YATVL FSS++PYGSIPS  IPFLLG+  R+  A 
Sbjct: 788  EPFIHLWGGGSPTSRLEGVDALPALYATVLKFSSSAPYGSIPSYHIPFLLGEPSRNNYAD 847

Query: 89   GQIGNLDVIPLGAVSERQDSFRARVVIEL 3
              I +L+++P+   S  ++ + A V I+L
Sbjct: 848  TPIDSLEIVPVENGSGDEEDYLAPVRIDL 876


>ref|XP_003537783.1| PREDICTED: uncharacterized protein LOC100789330 [Glycine max]
          Length = 1111

 Score =  360 bits (925), Expect = 2e-97
 Identities = 187/328 (57%), Positives = 239/328 (72%), Gaps = 3/328 (0%)
 Frame = -2

Query: 977  LELLTQFVIAIVKKHGPDTGLKSWSQGNKVLGICRTMLTHHHTSRVFLVLSRLLAFTCLY 798
            LELLT F+I +V+KHGPDTG+KSWSQG++ LGICRTML HHH+SR+FL LSRLL+FTCLY
Sbjct: 551  LELLTNFMIFLVEKHGPDTGMKSWSQGSRALGICRTMLMHHHSSRLFLRLSRLLSFTCLY 610

Query: 797  FPDLEVRDNARIYLRMLVCIPGRKLRHILNHEEQLPGKSPSSHTNSFHDTQ---PSQDFK 627
            FPDLEVRDN+RIYLRMLVCIPG+KLR ILN  + + G S SSH  SF + Q   PSQ  K
Sbjct: 611  FPDLEVRDNSRIYLRMLVCIPGKKLRDILNLGDTILGISQSSHPTSFFNVQSPRPSQKLK 670

Query: 626  KSRNLSTYIHLERVIELLVKQSWTLSISTLDIKSSKNDCFEGINDSEACVLVETDVDESS 447
              +NLS+ IHLER++ LLVKQ W+LS+S L + ++K    E I D +A V      D S+
Sbjct: 671  TFKNLSSCIHLERLVPLLVKQFWSLSLSNLVVSNTKPAYLESIRDLKAPVEENEFSDSSN 730

Query: 446  DIHVSESDRIDSSQEPLRVMDSKASEILGILRRHFICIPDFRYMPGFKIKILCTLRFESE 267
               + ES RI+  QEPLRVMDS+ +EIL  LR++F CIPDFRY+PG K++I C LRFES 
Sbjct: 731  TQIIPESGRINHPQEPLRVMDSRVAEILNTLRKYFSCIPDFRYIPGLKVRISCCLRFESN 790

Query: 266  PFNHIWGVKSTANNLDGCDHLPAIYATVLTFSSTSPYGSIPSRRIPFLLGDALRDANASG 87
             FN + G   TA +L+  D LPAIYATVL FSS++PY SIPS RIPFLLG+     +AS 
Sbjct: 791  TFNRMLGKDKTATSLEEVDALPAIYATVLKFSSSAPYVSIPSYRIPFLLGEPYNKDSAS- 849

Query: 86   QIGNLDVIPLGAVSERQDSFRARVVIEL 3
            Q  +L ++P+   ++ Q+  + R ++E+
Sbjct: 850  QDASLSIVPVDVGNDSQEEEKYRAIVEI 877


Top