BLASTX nr result

ID: Coptis24_contig00029722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029722
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328087.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_002270091.1| PREDICTED: nicotianamine synthase isoform 1 ...   166   1e-39
ref|XP_002533369.1| nicotianamine synthase, putative [Ricinus co...   155   4e-36
ref|XP_002533367.1| Nicotianamine synthase, putative [Ricinus co...   153   2e-35
gb|AFK44477.1| unknown [Medicago truncatula]                          147   1e-33

>ref|XP_002328087.1| predicted protein [Populus trichocarpa] gi|222837602|gb|EEE75967.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  171 bits (434), Expect = 4e-41
 Identities = 87/119 (73%), Positives = 99/119 (83%)
 Frame = +2

Query: 47  MATFQASVCESHVQDQVLIARVMQIHASICKLESLRPSKQVNSLFTQLVKLCILPSSIDI 226
           MA  Q S CES +  ++LIARV QIHASI KL SLRPSKQVNSLF+ LVKLCILPSSIDI
Sbjct: 1   MAALQISNCESQISTELLIARVTQIHASISKLSSLRPSKQVNSLFSNLVKLCILPSSIDI 60

Query: 227 TKLPPAVQLMRESLIKLCGHAEGLLELQFAHFLVNIPQPLDHLDVFPYYGNYVQLASLE 403
           T LP  VQ MRESLI LCGHAEGLLEL+FA FL  I QPL++L++FPYYGNYV+LA++E
Sbjct: 61  TALPEEVQAMRESLINLCGHAEGLLELEFATFLSKIHQPLNNLNLFPYYGNYVKLANIE 119


>ref|XP_002270091.1| PREDICTED: nicotianamine synthase isoform 1 [Vitis vinifera]
           gi|359485000|ref|XP_003633197.1| PREDICTED:
           nicotianamine synthase isoform 2 [Vitis vinifera]
           gi|147835105|emb|CAN70188.1| hypothetical protein
           VITISV_039081 [Vitis vinifera]
          Length = 284

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/119 (68%), Positives = 102/119 (85%)
 Frame = +2

Query: 47  MATFQASVCESHVQDQVLIARVMQIHASICKLESLRPSKQVNSLFTQLVKLCILPSSIDI 226
           MA+ Q S  +++V  ++LIAR++QIHA+ICKLESLRPSKQVNSLFT LVKLC  PSSIDI
Sbjct: 1   MASLQQSSLKTNVSTELLIARIVQIHANICKLESLRPSKQVNSLFTHLVKLCTPPSSIDI 60

Query: 227 TKLPPAVQLMRESLIKLCGHAEGLLELQFAHFLVNIPQPLDHLDVFPYYGNYVQLASLE 403
           T LP  +QL+R+SLI LCG AEGLLEL+F+ FL N+PQ L++L++FPYYGNYV+LA+LE
Sbjct: 61  TALPEEIQLIRQSLITLCGRAEGLLELEFSTFLTNVPQALNNLNLFPYYGNYVKLANLE 119


>ref|XP_002533369.1| nicotianamine synthase, putative [Ricinus communis]
           gi|223526791|gb|EEF29014.1| nicotianamine synthase,
           putative [Ricinus communis]
          Length = 669

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/119 (65%), Positives = 93/119 (78%)
 Frame = +2

Query: 47  MATFQASVCESHVQDQVLIARVMQIHASICKLESLRPSKQVNSLFTQLVKLCILPSSIDI 226
           MA+ Q S   S +  +V I R+ QIH +I KL+SLRPSKQVNSLF+ LVKLCILPSSI+I
Sbjct: 1   MASLQNSNSGSQIPAEVFIPRIKQIHGAISKLDSLRPSKQVNSLFSHLVKLCILPSSINI 60

Query: 227 TKLPPAVQLMRESLIKLCGHAEGLLELQFAHFLVNIPQPLDHLDVFPYYGNYVQLASLE 403
           T LP   Q MR+SLI LCG AEGLLEL FA FL+  PQP +HL++FPYYGNYV+LA+LE
Sbjct: 61  TSLPKEAQEMRKSLIDLCGRAEGLLELDFATFLIKSPQPFNHLNLFPYYGNYVKLANLE 119


>ref|XP_002533367.1| Nicotianamine synthase, putative [Ricinus communis]
           gi|223526789|gb|EEF29012.1| Nicotianamine synthase,
           putative [Ricinus communis]
          Length = 319

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/124 (61%), Positives = 98/124 (79%)
 Frame = +2

Query: 32  LLTISMATFQASVCESHVQDQVLIARVMQIHASICKLESLRPSKQVNSLFTQLVKLCILP 211
           L ++ MA+ Q +  +S +  ++LIA + QIH +I KL+SLRPSKQVN LF+ LVKLCI+P
Sbjct: 31  LSSLPMASLQNTNFDSQIPAELLIASITQIHGAISKLDSLRPSKQVNGLFSHLVKLCIIP 90

Query: 212 SSIDITKLPPAVQLMRESLIKLCGHAEGLLELQFAHFLVNIPQPLDHLDVFPYYGNYVQL 391
           SSIDIT LP   Q MR+SLI LCG AEGLLEL+FA FL+ IPQPL ++++FPYY NYV+L
Sbjct: 91  SSIDITSLPEEAQEMRKSLIVLCGRAEGLLELEFATFLIKIPQPLANVNLFPYYANYVKL 150

Query: 392 ASLE 403
           A+LE
Sbjct: 151 ANLE 154


>gb|AFK44477.1| unknown [Medicago truncatula]
          Length = 284

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/119 (60%), Positives = 93/119 (78%)
 Frame = +2

Query: 47  MATFQASVCESHVQDQVLIARVMQIHASICKLESLRPSKQVNSLFTQLVKLCILPSSIDI 226
           MA+FQ+   E+ +  ++LI+++MQIH +I KLESLRPSKQVN+L T LVKLCILPSSI+I
Sbjct: 1   MASFQSFNFETEIPQELLISQIMQIHTTISKLESLRPSKQVNTLLTHLVKLCILPSSIEI 60

Query: 227 TKLPPAVQLMRESLIKLCGHAEGLLELQFAHFLVNIPQPLDHLDVFPYYGNYVQLASLE 403
             LP  V+ MRESLI +CG AEGLLEL+F+ F+   P P  +L +FPYYGNYV+LA+ E
Sbjct: 61  EALPQEVKTMRESLIPICGKAEGLLELEFSTFISQTPNPAKNLTLFPYYGNYVKLANYE 119


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