BLASTX nr result
ID: Coptis24_contig00029720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029720 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20594.3| unnamed protein product [Vitis vinifera] 137 7e-31 ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cuc... 134 8e-30 ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi... 134 8e-30 gb|ADE77588.1| unknown [Picea sitchensis] 111 5e-23 gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta] 110 2e-22 >emb|CBI20594.3| unnamed protein product [Vitis vinifera] Length = 572 Score = 137 bits (346), Expect = 7e-31 Identities = 67/84 (79%), Positives = 74/84 (88%) Frame = -3 Query: 253 EFFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAI 74 EFFMGD SHP+++KIYSMI EL +MKLAGYKP TDLVVHS+DEEEKED L HSEKLAI Sbjct: 447 EFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAI 506 Query: 73 AFGLISTREGTTIRVMKNLRVCTD 2 AFGLIST EGTTIRV+KNLR+C D Sbjct: 507 AFGLISTSEGTTIRVVKNLRICND 530 >ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus] Length = 2355 Score = 134 bits (337), Expect = 8e-30 Identities = 63/84 (75%), Positives = 74/84 (88%) Frame = -3 Query: 253 EFFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAI 74 EFFMGD SHPQ+ +IYSMI EL +MK+AGYKP TDLV+H++DEEEKED L THSEKLA+ Sbjct: 542 EFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLAL 601 Query: 73 AFGLISTREGTTIRVMKNLRVCTD 2 AFGLI+T EGTTIR++KNLRVC D Sbjct: 602 AFGLINTSEGTTIRIVKNLRVCND 625 >ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis sativus] Length = 632 Score = 134 bits (337), Expect = 8e-30 Identities = 63/84 (75%), Positives = 74/84 (88%) Frame = -3 Query: 253 EFFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAI 74 EFFMGD SHPQ+ +IYSMI EL +MK+AGYKP TDLV+H++DEEEKED L THSEKLA+ Sbjct: 511 EFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLAL 570 Query: 73 AFGLISTREGTTIRVMKNLRVCTD 2 AFGLI+T EGTTIR++KNLRVC D Sbjct: 571 AFGLINTSEGTTIRIVKNLRVCND 594 >gb|ADE77588.1| unknown [Picea sitchensis] Length = 312 Score = 111 bits (278), Expect = 5e-23 Identities = 53/83 (63%), Positives = 65/83 (78%) Frame = -3 Query: 250 FFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAIA 71 F +GD SHPQT+ IY+M+ L +M+ GY P TD V+H V+EE KE++LF HSEKLAIA Sbjct: 192 FVVGDISHPQTEAIYAMLETLARQMEAVGYVPCTDFVLHDVEEEIKENMLFAHSEKLAIA 251 Query: 70 FGLISTREGTTIRVMKNLRVCTD 2 FGLISTR GT+IR+ KNLRVC D Sbjct: 252 FGLISTRSGTSIRITKNLRVCGD 274 >gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta] Length = 152 Score = 110 bits (274), Expect = 2e-22 Identities = 53/83 (63%), Positives = 62/83 (74%) Frame = -3 Query: 250 FFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAIA 71 F GDRSHPQ +KIY+ + L MK GY P+T+ V+H V+EE+KE LF HSEKLAIA Sbjct: 39 FVAGDRSHPQAEKIYAKLERLTGEMKETGYMPHTEFVLHDVEEEQKEQFLFYHSEKLAIA 98 Query: 70 FGLISTREGTTIRVMKNLRVCTD 2 FGLIST GT IRV+KNLRVC D Sbjct: 99 FGLISTPAGTPIRVIKNLRVCGD 121