BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029720
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20594.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cuc...   134   8e-30
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
gb|ADE77588.1| unknown [Picea sitchensis]                             111   5e-23
gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta]      110   2e-22

>emb|CBI20594.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/84 (79%), Positives = 74/84 (88%)
 Frame = -3

Query: 253 EFFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAI 74
           EFFMGD SHP+++KIYSMI EL  +MKLAGYKP TDLVVHS+DEEEKED L  HSEKLAI
Sbjct: 447 EFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAI 506

Query: 73  AFGLISTREGTTIRVMKNLRVCTD 2
           AFGLIST EGTTIRV+KNLR+C D
Sbjct: 507 AFGLISTSEGTTIRVVKNLRICND 530


>ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/84 (75%), Positives = 74/84 (88%)
 Frame = -3

Query: 253 EFFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAI 74
           EFFMGD SHPQ+ +IYSMI EL  +MK+AGYKP TDLV+H++DEEEKED L THSEKLA+
Sbjct: 542 EFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLAL 601

Query: 73  AFGLISTREGTTIRVMKNLRVCTD 2
           AFGLI+T EGTTIR++KNLRVC D
Sbjct: 602 AFGLINTSEGTTIRIVKNLRVCND 625


>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/84 (75%), Positives = 74/84 (88%)
 Frame = -3

Query: 253 EFFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAI 74
           EFFMGD SHPQ+ +IYSMI EL  +MK+AGYKP TDLV+H++DEEEKED L THSEKLA+
Sbjct: 511 EFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLAL 570

Query: 73  AFGLISTREGTTIRVMKNLRVCTD 2
           AFGLI+T EGTTIR++KNLRVC D
Sbjct: 571 AFGLINTSEGTTIRIVKNLRVCND 594


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/83 (63%), Positives = 65/83 (78%)
 Frame = -3

Query: 250 FFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAIA 71
           F +GD SHPQT+ IY+M+  L  +M+  GY P TD V+H V+EE KE++LF HSEKLAIA
Sbjct: 192 FVVGDISHPQTEAIYAMLETLARQMEAVGYVPCTDFVLHDVEEEIKENMLFAHSEKLAIA 251

Query: 70  FGLISTREGTTIRVMKNLRVCTD 2
           FGLISTR GT+IR+ KNLRVC D
Sbjct: 252 FGLISTRSGTSIRITKNLRVCGD 274


>gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta]
          Length = 152

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/83 (63%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 FFMGDRSHPQTDKIYSMISELGSRMKLAGYKPNTDLVVHSVDEEEKEDVLFTHSEKLAIA 71
           F  GDRSHPQ +KIY+ +  L   MK  GY P+T+ V+H V+EE+KE  LF HSEKLAIA
Sbjct: 39  FVAGDRSHPQAEKIYAKLERLTGEMKETGYMPHTEFVLHDVEEEQKEQFLFYHSEKLAIA 98

Query: 70  FGLISTREGTTIRVMKNLRVCTD 2
           FGLIST  GT IRV+KNLRVC D
Sbjct: 99  FGLISTPAGTPIRVIKNLRVCGD 121