BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029714
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   7e-23
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        74   2e-22
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   3e-22
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    65   4e-22
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    70   8e-22

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 72.0 bits (175), Expect(2) = 7e-23
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = +2

Query: 167 ATSAFLLGIAIQDNILLSHELLHNYHRDAAPPRCVAKIDLKKAYDSIRWEVVEYAMQRIG 346
           A S F+ G  I DNILL+ EL+  Y R    PRC+ K+D++KAYDS+ W  +E  +   G
Sbjct: 546 AQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFG 605

Query: 347 LPRKFIQWV 373
            P +F+ W+
Sbjct: 606 FPSRFVGWI 614



 Score = 60.1 bits (144), Expect(2) = 7e-23
 Identities = 27/50 (54%), Positives = 37/50 (74%)
 Frame = +3

Query: 9   MLREVNSTCITLVPKVQSPSSLTDYRPISCCGVMYKCISKILTNRMKKFI 158
           M R +N   +TL+PKVQ  + + ++RPI+CC V+YK ISK+LTNRMK  I
Sbjct: 490 MHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGII 539


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 73.6 bits (179), Expect(2) = 2e-22
 Identities = 32/69 (46%), Positives = 49/69 (71%)
 Frame = +2

Query: 167 ATSAFLLGIAIQDNILLSHELLHNYHRDAAPPRCVAKIDLKKAYDSIRWEVVEYAMQRIG 346
           A SAFL G ++ +N+LL+ +L+H Y+     PR + K+DLKKA+DS+RWE V  A++ + 
Sbjct: 555 AQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALA 614

Query: 347 LPRKFIQWV 373
           +P KFI W+
Sbjct: 615 IPEKFINWI 623



 Score = 57.0 bits (136), Expect(2) = 2e-22
 Identities = 21/52 (40%), Positives = 40/52 (76%)
 Frame = +3

Query: 3   GMMLREVNSTCITLVPKVQSPSSLTDYRPISCCGVMYKCISKILTNRMKKFI 158
           G +L++ N+T I L+PK+ +P+  +D+RPISC   +YK I+++LT+R+++ +
Sbjct: 497 GCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLL 548


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 69.7 bits (169), Expect(2) = 3e-22
 Identities = 30/69 (43%), Positives = 45/69 (65%)
 Frame = +2

Query: 167 ATSAFLLGIAIQDNILLSHELLHNYHRDAAPPRCVAKIDLKKAYDSIRWEVVEYAMQRIG 346
           A + F+    I DNILL+ EL+  Y+R    PRCV K+D++KAYDS+ W  +E  ++ +G
Sbjct: 549 AQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELG 608

Query: 347 LPRKFIQWV 373
            P  FI+W+
Sbjct: 609 FPSMFIRWI 617



 Score = 60.5 bits (145), Expect(2) = 3e-22
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   GMMLREVNSTCITLVPKVQSPSSLTDYRPISCCGVMYKCISKILTNRMKKFI 158
           G M + +N T +TL+PK+       DYRPI+CC  +YK ISKILT R++  I
Sbjct: 491 GFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVI 542


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 65.5 bits (158), Expect(2) = 4e-22
 Identities = 26/71 (36%), Positives = 46/71 (64%)
 Frame = +2

Query: 161 LGATSAFLLGIAIQDNILLSHELLHNYHRDAAPPRCVAKIDLKKAYDSIRWEVVEYAMQR 340
           +G  SAF+    + +N+LL+ EL+ +YH+D+   RC  KID+ KA+DS++W  + + +  
Sbjct: 280 VGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAA 339

Query: 341 IGLPRKFIQWV 373
           +  P +FI W+
Sbjct: 340 MNFPGEFIHWI 350



 Score = 63.9 bits (154), Expect(2) = 4e-22
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +3

Query: 3   GMMLREVNSTCITLVPKVQSPSSLTDYRPISCCGVMYKCISKILTNRMKKFI 158
           G + + VNST + L+PK +    + DYRPISCC V+YK ISKIL NR+K+ +
Sbjct: 224 GFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRIL 275


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 69.7 bits (169), Expect(2) = 8e-22
 Identities = 28/67 (41%), Positives = 44/67 (65%)
 Frame = +2

Query: 173  SAFLLGIAIQDNILLSHELLHNYHRDAAPPRCVAKIDLKKAYDSIRWEVVEYAMQRIGLP 352
            SAF+    + +N+LL+ EL+ +YH+D   PRC  KIDL KA+DS++W  +   +  + +P
Sbjct: 829  SAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIP 888

Query: 353  RKFIQWV 373
             KFI W+
Sbjct: 889  EKFIHWI 895



 Score = 58.9 bits (141), Expect(2) = 8e-22
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +3

Query: 3   GMMLREVNSTCITLVPKVQSPSSLTDYRPISCCGVMYKCISKILTNRMK 149
           G + + +NST + L+PK      + DYRPISCC V+YK ISK+L NR+K
Sbjct: 769 GFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLK 817