BLASTX nr result

ID: Coptis24_contig00029713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029713
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332381.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
emb|CBI28139.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002529355.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002281699.1| PREDICTED: uncharacterized protein LOC100262...    70   2e-10
ref|XP_003528282.1| PREDICTED: uncharacterized protein LOC100815...    62   4e-08

>ref|XP_002332381.1| predicted protein [Populus trichocarpa] gi|222832205|gb|EEE70682.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -3

Query: 315 YEGVWALIWLCYDLGSKAWTWVPLPEFRMKGLNIAGITLSSGLTI 181
           Y+G+W +IWL YD+G   W W+PLP+ +MKGLN+AGI  SSGLT+
Sbjct: 350 YDGLWDIIWLSYDMGRSLWAWLPLPDCKMKGLNMAGIAFSSGLTL 394


>emb|CBI28139.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = -3

Query: 315 YEGVWALIWLCYDLGSKAWTWVPLPEFRMKGLNIAGITLSSGLTI 181
           Y G+W +IWL YD+G   WT +PLP+F MKGLN+AGIT SSGLT+
Sbjct: 342 YRGLWHIIWLSYDIGRDDWTLLPLPDFDMKGLNMAGITFSSGLTL 386


>ref|XP_002529355.1| conserved hypothetical protein [Ricinus communis]
           gi|223531175|gb|EEF33022.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = -3

Query: 315 YEGVWALIWLCYDLGSKAWTWVPLPEFRMKGLNIAGITLSSGLTI 181
           +EG+W +IWLCY+L    WTWVPLP  +MKGLN+AGI  SSGLT+
Sbjct: 351 FEGLWDIIWLCYNLQRCYWTWVPLPICKMKGLNMAGIAFSSGLTL 395


>ref|XP_002281699.1| PREDICTED: uncharacterized protein LOC100262914 [Vitis vinifera]
          Length = 395

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = -3

Query: 315 YEGVWALIWLCYDLGSKAWTWVPLPEFRMKGLNIAGITLSSGLTI 181
           Y G+W +IWL YD+G   WT +PLP+F MKGLN+AGIT SSGLT+
Sbjct: 350 YRGLWHIIWLSYDIGRDDWTLLPLPDFDMKGLNMAGITFSSGLTL 394


>ref|XP_003528282.1| PREDICTED: uncharacterized protein LOC100815083 [Glycine max]
          Length = 397

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = -3

Query: 312 EGVWALIWLCYDLGSKAWTWVPLPEFRMKGLNIAGITLSSGLTI 181
           EGVW + WL +D     WTW+PLP+ +MKG N+AGI+ SSGLT+
Sbjct: 353 EGVWDMTWLSFDTKWNRWTWMPLPDCKMKGWNMAGISFSSGLTL 396


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