BLASTX nr result

ID: Coptis24_contig00029707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029707
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41221.1| unknown [Lotus japonicus]                              146   2e-33
gb|AFK35932.1| unknown [Lotus japonicus]                              146   2e-33
ref|XP_003606631.1| Histone H2B [Medicago truncatula] gi|3555076...   146   2e-33
ref|XP_003606627.1| Histone H2B [Medicago truncatula] gi|3574726...   146   2e-33
ref|XP_002315342.1| histone H2 [Populus trichocarpa] gi|22286438...   146   2e-33

>gb|AFK41221.1| unknown [Lotus japonicus]
          Length = 105

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/77 (96%), Positives = 76/77 (98%)
 Frame = +3

Query: 156 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKHTITSR 335
           NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK TITSR
Sbjct: 14  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 73

Query: 336 EIQTAVRLLLPGELAQH 386
           EIQTAVRL+LPGELA+H
Sbjct: 74  EIQTAVRLVLPGELAKH 90


>gb|AFK35932.1| unknown [Lotus japonicus]
          Length = 142

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/77 (96%), Positives = 76/77 (98%)
 Frame = +3

Query: 156 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKHTITSR 335
           NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK TITSR
Sbjct: 51  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 110

Query: 336 EIQTAVRLLLPGELAQH 386
           EIQTAVRL+LPGELA+H
Sbjct: 111 EIQTAVRLVLPGELAKH 127


>ref|XP_003606631.1| Histone H2B [Medicago truncatula] gi|355507686|gb|AES88828.1|
           Histone H2B [Medicago truncatula]
          Length = 147

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/77 (96%), Positives = 76/77 (98%)
 Frame = +3

Query: 156 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKHTITSR 335
           NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK TITSR
Sbjct: 56  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 115

Query: 336 EIQTAVRLLLPGELAQH 386
           EIQTAVRL+LPGELA+H
Sbjct: 116 EIQTAVRLVLPGELAKH 132


>ref|XP_003606627.1| Histone H2B [Medicago truncatula] gi|357472689|ref|XP_003606629.1|
           Histone H2B [Medicago truncatula]
           gi|355507682|gb|AES88824.1| Histone H2B [Medicago
           truncatula] gi|355507684|gb|AES88826.1| Histone H2B
           [Medicago truncatula] gi|388495180|gb|AFK35656.1|
           unknown [Medicago truncatula]
          Length = 148

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/77 (96%), Positives = 76/77 (98%)
 Frame = +3

Query: 156 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKHTITSR 335
           NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK TITSR
Sbjct: 57  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 116

Query: 336 EIQTAVRLLLPGELAQH 386
           EIQTAVRL+LPGELA+H
Sbjct: 117 EIQTAVRLVLPGELAKH 133


>ref|XP_002315342.1| histone H2 [Populus trichocarpa] gi|222864382|gb|EEF01513.1|
           histone H2 [Populus trichocarpa]
          Length = 140

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/77 (96%), Positives = 76/77 (98%)
 Frame = +3

Query: 156 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKHTITSR 335
           NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK TITSR
Sbjct: 49  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 108

Query: 336 EIQTAVRLLLPGELAQH 386
           EIQTAVRL+LPGELA+H
Sbjct: 109 EIQTAVRLVLPGELAKH 125


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