BLASTX nr result

ID: Coptis24_contig00029702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029702
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280115.2| PREDICTED: uncharacterized protein LOC100254...   285   2e-74
ref|XP_002322260.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69
ref|XP_002511179.1| conserved hypothetical protein [Ricinus comm...   266   7e-69
ref|XP_003525535.1| PREDICTED: uncharacterized protein LOC100792...   243   5e-62
ref|XP_003522435.1| PREDICTED: uncharacterized protein LOC100787...   243   7e-62

>ref|XP_002280115.2| PREDICTED: uncharacterized protein LOC100254191 [Vitis vinifera]
          Length = 326

 Score =  285 bits (729), Expect = 2e-74
 Identities = 138/236 (58%), Positives = 177/236 (75%), Gaps = 2/236 (0%)
 Frame = -3

Query: 813 CSSKSP-CTNLPSDIPHSLMHQDTSSSVAD-LTKKELQLLRNIISKRSPCKLLVFGLPPE 640
           CSS SP C   P   P +   Q  +S+ A  LT+KE QLL N+IS R+PC LL+FGL P+
Sbjct: 91  CSSASPTCRKTPLRAPGARRSQHNNSANATALTEKEFQLLSNLISHRAPCNLLIFGLEPQ 150

Query: 639 YLFLSSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVC 460
           +L L+S+N  GTTI L+D+P  L T+R  +  T+IYKV+HH+ A EAY +LK AR DP C
Sbjct: 151 HLVLASMNAGGTTILLEDDPAKLSTVRRRSNNTRIYKVEHHIPAGEAYRVLKHAREDPAC 210

Query: 459 APQAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTG 280
           AP + PL  S+C+LAL +LP  VYELKWDV++VDG   D+ EAPGRM+AIYTA+MIAR G
Sbjct: 211 APHSKPLEESTCQLALTKLPQEVYELKWDVVVVDGPRGDRAEAPGRMAAIYTASMIARAG 270

Query: 279 NLTDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCSRTTIQ 112
           N+T+V+VHDVD+MIEKWF+ EFLC+ENL+SSKGKLW+ R+ G S+ST FC   T+Q
Sbjct: 271 NMTNVVVHDVDRMIEKWFSWEFLCDENLVSSKGKLWNFRLVGKSNSTRFCPSETVQ 326


>ref|XP_002322260.1| predicted protein [Populus trichocarpa] gi|222869256|gb|EEF06387.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  267 bits (683), Expect = 3e-69
 Identities = 131/237 (55%), Positives = 168/237 (70%), Gaps = 2/237 (0%)
 Frame = -3

Query: 813 CSSKSP-CTNLPSDIP-HSLMHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPE 640
           CS+ SP C   PS  P +    Q  ++    LTKKE +LL ++I +++PC LLVFG  P+
Sbjct: 77  CSTPSPACEKAPSHTPSNQTAQQKIAADEPSLTKKEFKLLSDLIKRKAPCNLLVFGAEPQ 136

Query: 639 YLFLSSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVC 460
           YL LSS+N+ GTTI L+D+P+ +   R  +  TQIYK+ +   AK+AY LL+ AR  P C
Sbjct: 137 YLRLSSINSGGTTILLEDDPDKISAARAKSNTTQIYKIDYQTPAKKAYKLLEHARKSPAC 196

Query: 459 APQAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTG 280
           AP    L+ SSCKLALK LP  VYEL+W+V++VDG S   PEAPGRM AIYTA+MIAR G
Sbjct: 197 APNPEMLQNSSCKLALKNLPREVYELEWNVVVVDGPSGHSPEAPGRMGAIYTASMIARAG 256

Query: 279 NLTDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCSRTTIQI 109
           N TDVLVHDVD+ IEKWF+ EFLC+ENL++SKGKLW  RI+G S+S+ FCS   + I
Sbjct: 257 NTTDVLVHDVDRTIEKWFSWEFLCDENLVASKGKLWSFRISGKSNSSGFCSDHMVAI 313


>ref|XP_002511179.1| conserved hypothetical protein [Ricinus communis]
           gi|223550294|gb|EEF51781.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 328

 Score =  266 bits (680), Expect = 7e-69
 Identities = 130/229 (56%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
 Frame = -3

Query: 810 SSKSPCTNLPSDIPHSL-MHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYL 634
           SS + C+ + S+I  S    Q++S+S   LTKKE +LL N+I  ++PC LL+FGL  ++L
Sbjct: 93  SSSTKCSAVSSNISSSPPTQQNSSTSATILTKKEFKLLSNVIKHKAPCNLLIFGLSAQFL 152

Query: 633 FLSSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVCAP 454
            LSS+N+ GTTIFL+D+P+ + +IR  + +T IYK  +HV AK+AYNLLK AR    CAP
Sbjct: 153 KLSSINSGGTTIFLEDDPDRISSIRAKSNSTLIYKFDYHVPAKKAYNLLKHARESQDCAP 212

Query: 453 QAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTGNL 274
            +G L+ S+CKLAL  LP  VY+ KWDV++VDG S   PEAPGRM+AIYTA MIAR G+ 
Sbjct: 213 SSGRLQNSTCKLALTNLPGEVYQQKWDVVVVDGPSGHSPEAPGRMAAIYTAGMIARAGHT 272

Query: 273 TDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCS 127
           TDVLVHDVD+ IEKWF+ EFLC+ENL+SSKGKLW+ RIT   +S +FC+
Sbjct: 273 TDVLVHDVDRTIEKWFSWEFLCDENLVSSKGKLWNFRITSKPNSRTFCT 321


>ref|XP_003525535.1| PREDICTED: uncharacterized protein LOC100792528 [Glycine max]
          Length = 292

 Score =  243 bits (621), Expect = 5e-62
 Identities = 118/226 (52%), Positives = 163/226 (72%), Gaps = 2/226 (0%)
 Frame = -3

Query: 801 SPCTNLPSDIPHSLMHQ-DTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYLFLS 625
           S C    S  P S     +T +    LT+KE ++L ++I+ +SPC LL+FG  P+YL LS
Sbjct: 57  STCNKTASHAPESSDQPINTPNITTTLTEKEFKVLSDLIALKSPCNLLIFGFQPQYLILS 116

Query: 624 SLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPV-CAPQA 448
           S+N  G+TIFLD++P+ +  +R  +  TQIYK+++++ AK  Y LLK AR++P  C P  
Sbjct: 117 SMNAAGSTIFLDEDPDKISKVRKISNNTQIYKLEYNMPAKAGYKLLKNARLNPATCVPNP 176

Query: 447 GPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTGNLTD 268
             L+ S CKLALK LP+ VYE KWDV++VDG + D PE+PGRM +IYTA+++AR+GN +D
Sbjct: 177 RFLQKSKCKLALKNLPSQVYEKKWDVMVVDGPNGDSPESPGRMGSIYTASVLARSGNTSD 236

Query: 267 VLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFC 130
           V+VHDVD+MIEKWF+ EFLC+ NL+ SKGKLWH RI  +S+ST FC
Sbjct: 237 VVVHDVDRMIEKWFSWEFLCDGNLLYSKGKLWHFRIKVHSNSTRFC 282


>ref|XP_003522435.1| PREDICTED: uncharacterized protein LOC100787566 [Glycine max]
          Length = 292

 Score =  243 bits (620), Expect = 7e-62
 Identities = 129/289 (44%), Positives = 184/289 (63%), Gaps = 2/289 (0%)
 Frame = -3

Query: 987 KNKNQREGQGKRRMNITTKKLLVIVFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKCS 808
           +  +QR+ QG   MN+T KK LV +                                  S
Sbjct: 25  QRSSQRDHQG---MNLTNKKKLVPILLLILSIISILMLLSLILRS------------SSS 69

Query: 807 SKSPCTNLPSDIPHSLMHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYLFL 628
           + SP T   S  P S  H +++     LT+KE ++L N+++ +SPC LL+FG  P+YL L
Sbjct: 70  AMSPPT--ASHAPESSKHPNST-----LTEKEFKVLSNLVALKSPCNLLIFGFQPQYLTL 122

Query: 627 SSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVCAPQA 448
           SS+N  G+TIFL D+ + +  + TN+  TQ Y++ ++V +K+A+NLLK AR +  CAP  
Sbjct: 123 SSMNAPGSTIFLYDHDDMIAKVATNSNNTQTYQLGYNVPSKKAFNLLKHARQNQACAPSY 182

Query: 447 GP--LRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTGNL 274
               L+ S CK AL+ LP+ VYE KWD+I+VDG   D PE+PGRM +IYTA+++AR GN+
Sbjct: 183 PTQLLQKSKCKFALRNLPSEVYEKKWDIIVVDGPKGDSPESPGRMDSIYTASVLARAGNV 242

Query: 273 TDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSSTSFCS 127
           +DV+VHD+D+MIEKWF+ EFLC ENL+ SKGKLWH RI+G+S+ST+FC+
Sbjct: 243 SDVVVHDIDRMIEKWFSWEFLCHENLLCSKGKLWHFRISGHSNSTTFCT 291


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