BLASTX nr result
ID: Coptis24_contig00029700
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029700 (363 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265303.2| PREDICTED: uncharacterized protein LOC100266... 144 1e-32 ref|XP_004158679.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 130 1e-28 ref|XP_004134515.1| PREDICTED: uncharacterized protein LOC101220... 130 1e-28 ref|XP_003534858.1| PREDICTED: uncharacterized protein LOC100797... 119 2e-25 dbj|BAC20744.1| WD-40 repeat protein-like [Oryza sativa Japonica... 117 1e-24 >ref|XP_002265303.2| PREDICTED: uncharacterized protein LOC100266712 [Vitis vinifera] gi|297738186|emb|CBI27387.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 144 bits (362), Expect = 1e-32 Identities = 71/128 (55%), Positives = 89/128 (69%), Gaps = 7/128 (5%) Frame = -1 Query: 363 LGSETSGGSVYFMKLNELLDLTPTSIF-----EVGSLNCTIWTAECHPDGLHAVIGTNRG 199 LGSET GGSVY + L LD I EV S NCTIWTA+C+ G AVIGTN G Sbjct: 218 LGSETIGGSVYILNLTRPLDFNSIPIIRQRMHEVASFNCTIWTADCNSKGSQAVIGTNVG 277 Query: 198 AAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQGTMV--SR 25 A++N+ET SW+C +KSDV SLQ ++SGNV+LCG RNG +VTVDVR+KQ+G +R Sbjct: 278 VALVNMETRVPSWVCRTKSDVLSLQLDQSGNVVLCGLRNGAVVTVDVREKQEGAYARHTR 337 Query: 24 HRIPFSSN 1 HR+P+ S+ Sbjct: 338 HRVPYPSH 345 >ref|XP_004158679.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230256 [Cucumis sativus] Length = 515 Score = 130 bits (326), Expect = 1e-28 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 7/125 (5%) Frame = -1 Query: 363 LGSETSGGSVYFMKLNELLDLTPT------SIFEVGSLNCTIWTAECHPDGLHAVIGTNR 202 LGS+ SGGSVY + L E LD T I EV S +C+IWTA+C G AVIGTN Sbjct: 223 LGSDVSGGSVYILNLVEPLDFNRTIPVIRRRIHEVASFDCSIWTADCQSSGGRAVIGTNI 282 Query: 201 GAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQ-GTMVSR 25 GAA +++ TG +SW+ H KSD+F+LQ S NV+LCG RNG IVT+D R++Q+ G + R Sbjct: 283 GAASVDMGTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDTRERQEVGKRLLR 342 Query: 24 HRIPF 10 HRIP+ Sbjct: 343 HRIPY 347 >ref|XP_004134515.1| PREDICTED: uncharacterized protein LOC101220880 [Cucumis sativus] Length = 515 Score = 130 bits (326), Expect = 1e-28 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 7/125 (5%) Frame = -1 Query: 363 LGSETSGGSVYFMKLNELLDLTPT------SIFEVGSLNCTIWTAECHPDGLHAVIGTNR 202 LGS+ SGGSVY + L E LD T I EV S +C+IWTA+C G AVIGTN Sbjct: 223 LGSDVSGGSVYILNLVEPLDFNRTIPVIRRRIHEVASFDCSIWTADCQSSGGRAVIGTNI 282 Query: 201 GAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQ-GTMVSR 25 GAA +++ TG +SW+ H KSD+F+LQ S NV+LCG RNG IVT+D R++Q+ G + R Sbjct: 283 GAASVDMGTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDTRERQEVGKRLLR 342 Query: 24 HRIPF 10 HRIP+ Sbjct: 343 HRIPY 347 >ref|XP_003534858.1| PREDICTED: uncharacterized protein LOC100797740, partial [Glycine max] Length = 510 Score = 119 bits (299), Expect = 2e-25 Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 9/130 (6%) Frame = -1 Query: 363 LGSETSGGSVYFMKLNELLDLTP------TSIFEVGSLNCTIWTAECHPDGLHAVIGTNR 202 LGSETSGG+VY + L E L+L P + + E+ S TIWT+E + AVIGTN Sbjct: 228 LGSETSGGTVYTLDLVEPLNLGPGILNTWSGLEEIASFRGTIWTSEYDYNRHRAVIGTNL 287 Query: 201 GAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQ---GTMV 31 GAA ++LETG +SW H KSDVF+ Q SGNV+LCG RNG IVTVD R++++ G ++ Sbjct: 288 GAASVDLETGTMSWFLHCKSDVFAQQIVNSGNVILCGLRNGAIVTVDSRERRESLSGRLI 347 Query: 30 SRHRIPFSSN 1 + HRIP++S+ Sbjct: 348 T-HRIPYASS 356 >dbj|BAC20744.1| WD-40 repeat protein-like [Oryza sativa Japonica Group] Length = 475 Score = 117 bits (293), Expect = 1e-24 Identities = 60/117 (51%), Positives = 76/117 (64%), Gaps = 11/117 (9%) Frame = -1 Query: 363 LGSETSGGSVYFMKLNELLDLTPTS-----------IFEVGSLNCTIWTAECHPDGLHAV 217 +GS SGGS++ M L++ +D+ S I V S N TIWTA+C+ DG AV Sbjct: 184 IGSGESGGSIHIMDLSDTIDVAMGSMNAYGGNIIGNIIPVASFNRTIWTADCNSDGTQAV 243 Query: 216 IGTNRGAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQ 46 IGTN GAA +LE A+SW+ H KSD+ S QF +SGNV+LCG RNG I +DVRQKQ Sbjct: 244 IGTNSGAAFFDLERRALSWMYHCKSDILSQQFMQSGNVVLCGLRNGSIFPLDVRQKQ 300