BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029693
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   498   e-138
gb|ABK92556.1| unknown [Populus trichocarpa]                          480   e-133
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...   473   e-131
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   461   e-127
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   447   e-123

>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
            vinifera]
          Length = 545

 Score =  498 bits (1281), Expect = e-138
 Identities = 253/323 (78%), Positives = 283/323 (87%), Gaps = 1/323 (0%)
 Frame = +2

Query: 2    NVQQFWISCSSRDKQLYILALLKFELVQKKVLIFVNAIDIGFRLRLFLEQFGMRSVVLNA 181
            NVQQFWISCS+RDK LYILALLK ELVQKK+LIF N+ID+ FRL+LFLE+FG++S VLNA
Sbjct: 195  NVQQFWISCSARDKLLYILALLKLELVQKKILIFTNSIDMAFRLKLFLEKFGIKSAVLNA 254

Query: 182  ELPQNSRLHILEEFNAGLFDYLIATDDRQTKE-EQVNKDTDVXXXXXXXXXXNKLDSEFG 358
            ELPQNSRLHILEEFNAGLFDYLIATD  Q KE EQ ++ + +           KLDSEFG
Sbjct: 255  ELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSRKHSKQKLDSEFG 314

Query: 359  VVRGIDFKNVYTVINFDMPQSSAAYIHRIGRTGRAYNTGASVSFVSSDEMEIFEEIKSSL 538
            VVRGIDFKNV+TVINF+MPQ++  Y+HRIGRTGRAYNTGASVS VS DEMEI EEIKS L
Sbjct: 315  VVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNTGASVSLVSPDEMEILEEIKSIL 374

Query: 539  DGDENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLK 718
              DEN  SNFIAPFPLL+KNAVESLRYRAEDV+KSVTK+AVRESRAQDLRNEI+NSEKLK
Sbjct: 375  GDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQDLRNEIVNSEKLK 434

Query: 719  AHFQDNPRDLDLLKHDKVLSKKPPPSHLRAVPEYLLDPTTQEASKILKLARAAMGNNNSS 898
            AHF+ N RDLDLLKHDKVLSKKP P+HLR VP+YLLDPTTQEASKI+KLARAAMGN N +
Sbjct: 435  AHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGNTNPA 494

Query: 899  RRQGSKRRFKKIRDPLRTFSAEA 967
            RRQGS+R+F+K RDPL+TFSAEA
Sbjct: 495  RRQGSRRKFRKSRDPLKTFSAEA 517


>gb|ABK92556.1| unknown [Populus trichocarpa]
          Length = 619

 Score =  480 bits (1235), Expect = e-133
 Identities = 242/322 (75%), Positives = 277/322 (86%), Gaps = 1/322 (0%)
 Frame = +2

Query: 2    NVQQFWISCSSRDKQLYILALLKFELVQKKVLIFVNAIDIGFRLRLFLEQFGMRSVVLNA 181
            NVQQFW+SC  RDK ++ILALLK +LVQKKVLIF NAID+ FRL+LFLE+FG++S VLNA
Sbjct: 269  NVQQFWVSCGDRDKLVHILALLKLDLVQKKVLIFTNAIDMSFRLKLFLEKFGIKSAVLNA 328

Query: 182  ELPQNSRLHILEEFNAGLFDYLIATDDRQTKE-EQVNKDTDVXXXXXXXXXXNKLDSEFG 358
            ELPQNSRLHILEEFNAGLFDYLIATDDR+TKE E+ N+ +             KLDSEFG
Sbjct: 329  ELPQNSRLHILEEFNAGLFDYLIATDDRETKEKEKANEGSLAETRKSKKHAKQKLDSEFG 388

Query: 359  VVRGIDFKNVYTVINFDMPQSSAAYIHRIGRTGRAYNTGASVSFVSSDEMEIFEEIKSSL 538
            VVRGIDFKNV+TVIN+DMP S+  Y+HRIGRTGRAY+TG+SVS VS DEMEI EEIKS L
Sbjct: 389  VVRGIDFKNVHTVINYDMPLSATGYVHRIGRTGRAYSTGSSVSLVSPDEMEILEEIKSFL 448

Query: 539  DGDENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLK 718
              DEN+ SN I+P+PLL+KNAVESLRYRAED AKSVTK+AVRE+RAQDLRNEI+NSEKLK
Sbjct: 449  GDDENNESNVISPYPLLTKNAVESLRYRAEDTAKSVTKIAVREARAQDLRNEILNSEKLK 508

Query: 719  AHFQDNPRDLDLLKHDKVLSKKPPPSHLRAVPEYLLDPTTQEASKILKLARAAMGNNNSS 898
            AHF+ NPRDLDLLKHDKVLSKKPP  HL  VP+YLLD TT+EASK++KLARAAMGNNNS 
Sbjct: 509  AHFEVNPRDLDLLKHDKVLSKKPPAPHLSDVPDYLLDATTKEASKMVKLARAAMGNNNSG 568

Query: 899  RRQGSKRRFKKIRDPLRTFSAE 964
            RRQG KR F+K +DPL++FSAE
Sbjct: 569  RRQGPKRNFRKSKDPLKSFSAE 590


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 616

 Score =  473 bits (1218), Expect = e-131
 Identities = 237/323 (73%), Positives = 275/323 (85%), Gaps = 1/323 (0%)
 Frame = +2

Query: 2    NVQQFWISCSSRDKQLYILALLKFELVQKKVLIFVNAIDIGFRLRLFLEQFGMRSVVLNA 181
            NVQQFWISCS RDK ++ILALLK +LVQKKVLIF N+ID+ FRLRLFLE+FG++S +LNA
Sbjct: 266  NVQQFWISCSGRDKLVHILALLKLDLVQKKVLIFTNSIDMSFRLRLFLEKFGIKSAILNA 325

Query: 182  ELPQNSRLHILEEFNAGLFDYLIATDDRQTKE-EQVNKDTDVXXXXXXXXXXNKLDSEFG 358
            ELPQNSRLHILEEFNAGLFDYLIATDD +TKE EQ   D ++           KLDSEFG
Sbjct: 326  ELPQNSRLHILEEFNAGLFDYLIATDDSETKEKEQEQADRNLAQSRKSKKSKQKLDSEFG 385

Query: 359  VVRGIDFKNVYTVINFDMPQSSAAYIHRIGRTGRAYNTGASVSFVSSDEMEIFEEIKSSL 538
            VVRGIDFKNV+TV+N+DMP ++A Y+HRIGRTGR YN+G+SVS VS DEMEI E++KS L
Sbjct: 386  VVRGIDFKNVHTVVNYDMPLNAAGYVHRIGRTGRGYNSGSSVSLVSPDEMEILEDVKSFL 445

Query: 539  DGDENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLK 718
              DEN  SN IAPFPLL+KNAVESLRYRAEDVAKSVTK+AV+E+RAQDLRNEI+NSEKLK
Sbjct: 446  GDDENKDSNIIAPFPLLTKNAVESLRYRAEDVAKSVTKIAVKEARAQDLRNEILNSEKLK 505

Query: 719  AHFQDNPRDLDLLKHDKVLSKKPPPSHLRAVPEYLLDPTTQEASKILKLARAAMGNNNSS 898
            AHF+ NPRDLDLLKHDKVLSK PP  HLR VP+YL+D TT+EASK++KLARAAMG NN S
Sbjct: 506  AHFEANPRDLDLLKHDKVLSKNPPAPHLRDVPDYLMDATTKEASKMVKLARAAMGKNNPS 565

Query: 899  RRQGSKRRFKKIRDPLRTFSAEA 967
            RRQGSK++F K +DPL+  S +A
Sbjct: 566  RRQGSKKKFIKSKDPLKALSFQA 588


>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
            sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
            sativus]
          Length = 596

 Score =  461 bits (1185), Expect = e-127
 Identities = 231/321 (71%), Positives = 273/321 (85%)
 Frame = +2

Query: 2    NVQQFWISCSSRDKQLYILALLKFELVQKKVLIFVNAIDIGFRLRLFLEQFGMRSVVLNA 181
            NVQQF ISC +RDK L+IL+LLK +LVQKKVLIF N+ID+GFRL+LFLE+FG++S +LNA
Sbjct: 249  NVQQFSISCDARDKLLHILSLLKLDLVQKKVLIFTNSIDMGFRLKLFLEKFGIKSAILNA 308

Query: 182  ELPQNSRLHILEEFNAGLFDYLIATDDRQTKEEQVNKDTDVXXXXXXXXXXNKLDSEFGV 361
            ELPQNSRLHILEEFNAGLFDYLIATDD QTKE++ N++ +V           K+DSEFGV
Sbjct: 309  ELPQNSRLHILEEFNAGLFDYLIATDDSQTKEKEANEEGNVDKRKSRKRAKQKIDSEFGV 368

Query: 362  VRGIDFKNVYTVINFDMPQSSAAYIHRIGRTGRAYNTGASVSFVSSDEMEIFEEIKSSLD 541
            VRGIDFKNVYTVINF++P S++ YIHRIGRTGRAYNTGAS+S VS DEM+ FEEI+S L 
Sbjct: 369  VRGIDFKNVYTVINFELPPSASGYIHRIGRTGRAYNTGASISLVSPDEMDNFEEIQSFLR 428

Query: 542  GDENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLKA 721
             D    ++ I PFPLL+KNAVESLRYRAEDV+KSVTK+A+RESRA DLRNEI+NSEKLKA
Sbjct: 429  AD--GDTDIIVPFPLLTKNAVESLRYRAEDVSKSVTKLAIRESRALDLRNEILNSEKLKA 486

Query: 722  HFQDNPRDLDLLKHDKVLSKKPPPSHLRAVPEYLLDPTTQEASKILKLARAAMGNNNSSR 901
            HF+ NP+DLDLLKHDK+LSK PP  HLR VP+YL+DP TQEASKI+KLARAAMGN  S R
Sbjct: 487  HFESNPKDLDLLKHDKILSKNPPAPHLRDVPDYLVDPVTQEASKIIKLARAAMGNVQSGR 546

Query: 902  RQGSKRRFKKIRDPLRTFSAE 964
            R+G KR+ +  +DPL+TFSAE
Sbjct: 547  RRGFKRKSRNDKDPLKTFSAE 567


>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine max]
          Length = 601

 Score =  447 bits (1149), Expect = e-123
 Identities = 232/323 (71%), Positives = 266/323 (82%), Gaps = 1/323 (0%)
 Frame = +2

Query: 2    NVQQFWISCSSRDKQLYILALLKFELVQKKVLIFVNAIDIGFRLRLFLEQFGMRSVVLNA 181
            NVQQFWISC + DK LYILA+LK  LVQKKVLIF N ID+ FRL+LFLE+FG+RS VLN 
Sbjct: 250  NVQQFWISCPASDKLLYILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEKFGIRSAVLNP 309

Query: 182  ELPQNSRLHILEEFNAGLFDYLIATDDRQTKE-EQVNKDTDVXXXXXXXXXXNKLDSEFG 358
            ELPQNSRLHILEEFNAGLFDYLIATD  Q+KE ++V K++ V           KLDSEFG
Sbjct: 310  ELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDEVPKESIVGSRKSRKHAKIKLDSEFG 369

Query: 359  VVRGIDFKNVYTVINFDMPQSSAAYIHRIGRTGRAYNTGASVSFVSSDEMEIFEEIKSSL 538
            VVRGIDFKNVYTVINF+MPQS A Y+HRIGRTGRAYN+GASVS VS+DEM+  EEI+S +
Sbjct: 370  VVRGIDFKNVYTVINFEMPQSVAGYVHRIGRTGRAYNSGASVSLVSTDEMDTLEEIRSFV 429

Query: 539  DGDENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLK 718
              DEN  +N IA FPLL+KNAVESLRYRAEDVAKSVT++AVRESRAQDLRNEI+NSEKLK
Sbjct: 430  GDDENKGTNSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLK 489

Query: 719  AHFQDNPRDLDLLKHDKVLSKKPPPSHLRAVPEYLLDPTTQEASKILKLARAAMGNNNSS 898
             HF+ NP+DLDLLKHDK+LSK  PP HLR VPEYLLD  T+EA +++KLAR AMGNNN  
Sbjct: 490  THFETNPKDLDLLKHDKILSKNAPPPHLRDVPEYLLDKPTKEAREMVKLARDAMGNNN-- 547

Query: 899  RRQGSKRRFKKIRDPLRTFSAEA 967
            RR+GSKR+ +K  DPL+   A A
Sbjct: 548  RRKGSKRKLRKEGDPLKAIYATA 570