BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029672
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    88   8e-16
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    88   8e-16
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               77   1e-12
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   1e-12
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    77   1e-12

>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/99 (42%), Positives = 63/99 (63%)
 Frame = -3

Query: 297 LMMRSIENRSIKMHPKCRRTQLSHLCFADDVLIFAKAEMDTVATILEVLTIFSKASGLSI 118
           L + ++E R + +HPKC    ++HL FADD+L+F    + ++  IL++L +F K SGL I
Sbjct: 219 LDLGAVEGRFV-LHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGI 277

Query: 117 NRNKTTILIGGLNTDESTAIAAFLGVQLVSPPITYLGVP 1
           N  KT +L+ G N + +  +AA LGV   S P+ YLGVP
Sbjct: 278 NLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVP 316


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/99 (42%), Positives = 63/99 (63%)
 Frame = -3

Query: 297 LMMRSIENRSIKMHPKCRRTQLSHLCFADDVLIFAKAEMDTVATILEVLTIFSKASGLSI 118
           L + ++E R + +HPKC    ++HL FADD+L+F    + ++  IL++L +F K SGL I
Sbjct: 219 LDLGAVEGRFV-LHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGI 277

Query: 117 NRNKTTILIGGLNTDESTAIAAFLGVQLVSPPITYLGVP 1
           N  KT +L+ G N + +  +AA LGV   S P+ YLGVP
Sbjct: 278 NLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVP 316


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = -3

Query: 276 NRSIKMHPKCRRTQLSHLCFADDVLIFAKAEMDTVATILEVLTIFSKASGLSINRNKTTI 97
           N    +HP C    ++HL FADDVL+F+     ++A IL +L  F + SGL INR KT +
Sbjct: 721 NGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTEL 780

Query: 96  LIGGLNTDESTAIAAFLGVQLVSPPITYLGVP 1
           L+ G N   + ++A  LG+   S P+ YLGVP
Sbjct: 781 LLDGGNFARNRSLADNLGITHGSLPVRYLGVP 812


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/86 (43%), Positives = 56/86 (65%)
 Frame = -3

Query: 258 HPKCRRTQLSHLCFADDVLIFAKAEMDTVATILEVLTIFSKASGLSINRNKTTILIGGLN 79
           HPKC R +L+HL FADD+L+FA+A+  +++ I+     FSKASGL  +  K+ I  GG+ 
Sbjct: 678 HPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVC 737

Query: 78  TDESTAIAAFLGVQLVSPPITYLGVP 1
            +E+  +A  + + + S P  YLGVP
Sbjct: 738 HEEAEQLADRIQMPIGSLPFRYLGVP 763


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = -3

Query: 276 NRSIKMHPKCRRTQLSHLCFADDVLIFAKAEMDTVATILEVLTIFSKASGLSINRNKTTI 97
           N    +HP C    ++HL FADDVL+F+     ++A IL +L  F + SGL INR KT +
Sbjct: 678 NGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTEL 737

Query: 96  LIGGLNTDESTAIAAFLGVQLVSPPITYLGVP 1
           L+ G N   + ++A  LG+   S P+ YLGVP
Sbjct: 738 LLDGGNFARNRSLADNLGITHGSLPVRYLGVP 769