BLASTX nr result

ID: Coptis24_contig00029670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029670
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                           132   5e-29
ref|XP_002321312.1| predicted protein [Populus trichocarpa] gi|2...   121   9e-26
gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indi...   116   2e-24
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]   114   1e-23
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]   112   4e-23

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  132 bits (331), Expect = 5e-29
 Identities = 71/158 (44%), Positives = 98/158 (62%)
 Frame = -3

Query: 478 TIRIQGLLKKRPITILIDSGSTHNFLDLESAKQGGCSVEPTAHMLVTVANGERIVSKAVC 299
           T+R+ G +K R I ILIDSGSTHNFLD   A + GC  E    + VTVA+G +++S + C
Sbjct: 11  TMRLCGTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLISSSTC 70

Query: 298 PNLKWTMQGHHFEDEIRILPLGGCDMVLGGDWLKKCGDILLNLNKLQISFKKDGKRITLT 119
              KW MQG  F+  + +LPL GCDMVLG  WLK+ G IL + +KL++ F+  G++I L 
Sbjct: 71  RAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQFQGQKIVLR 130

Query: 118 GGEENASLKMMSGNALKRFIKKNTHGLMGQLFSVTATP 5
            G    SLK++ G  LK+ +  +T      L S+ ATP
Sbjct: 131 -GSSGPSLKIIEGKQLKKMVLDDTALSAVHLCSIHATP 167


>ref|XP_002321312.1| predicted protein [Populus trichocarpa] gi|222862085|gb|EEE99627.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  121 bits (303), Expect = 9e-26
 Identities = 65/162 (40%), Positives = 100/162 (61%)
 Frame = -3

Query: 517 ISVNALGGNVSQNTIRIQGLLKKRPITILIDSGSTHNFLDLESAKQGGCSVEPTAHMLVT 338
           +S+NAL  N + NTIRI+G    R + ILIDSGSTHNF+D   A +   S+E +  + VT
Sbjct: 266 LSLNALADNYAHNTIRIRGNYHGRELVILIDSGSTHNFIDEHIAGELQISIERSLVLTVT 325

Query: 337 VANGERIVSKAVCPNLKWTMQGHHFEDEIRILPLGGCDMVLGGDWLKKCGDILLNLNKLQ 158
           +ANG  I+  +     KW MQ + F  +++IL LG CD+VLG DWL     +L +  K++
Sbjct: 326 IANGSTILCDSYTTEFKWFMQNYEFVVDLKILKLGRCDVVLGMDWLN--SQLLFDFIKIK 383

Query: 157 ISFKKDGKRITLTGGEENASLKMMSGNALKRFIKKNTHGLMG 32
           ISF+K+G+ I L G  E A+L+ ++   +++ ++    G +G
Sbjct: 384 ISFRKEGRMIELRGIVEGANLQCITVEKVQKNLRAAIIGFVG 425


>gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indica Group]
          Length = 471

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/159 (38%), Positives = 93/159 (58%)
 Frame = -3

Query: 532 ETNMEISVNALGGNVSQNTIRIQGLLKKRPITILIDSGSTHNFLDLESAKQGGCSVEPTA 353
           + N  IS+NAL G    NTIR++ L++ + + +L+DSGS+H+FLD   A+  G  ++P A
Sbjct: 24  DENCHISLNALSGANHVNTIRLRALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPIA 83

Query: 352 HMLVTVANGERIVSKAVCPNLKWTMQGHHFEDEIRILPLGGCDMVLGGDWLKKCGDILLN 173
             LV VANG+ I  + V P   W  QG  F  ++R++PLGG D +LG DWL + GD+  N
Sbjct: 84  PFLVKVANGDCIPCQFVVPQFTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCN 143

Query: 172 LNKLQISFKKDGKRITLTGGEENASLKMMSGNALKRFIK 56
             K  + F   G  + L G  ++ S   +S  +L + +K
Sbjct: 144 WAKKTLKFMYQGTWVELQGVPDSPSKTKLSAMSLSQVLK 182


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score =  114 bits (285), Expect = 1e-23
 Identities = 60/146 (41%), Positives = 87/146 (59%)
 Frame = -3

Query: 553 QGLLQEIETNMEISVNALGGNVSQNTIRIQGLLKKRPITILIDSGSTHNFLDLESAKQGG 374
           +GL +E E  +++S+NAL  N    T+ + G  K R + +LIDSGS+HNFL  + AK+  
Sbjct: 360 EGLXEEDE-QIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLIDSGSSHNFLSSKVAKRVD 418

Query: 373 CSVEPTAHMLVTVANGERIVSKAVCPNLKWTMQGHHFEDEIRILPLGGCDMVLGGDWLKK 194
           C  +    + VTVANG+ +   A+C + +W MQG  F  E+ +LPL   D++LG  WL  
Sbjct: 419 CCWQKARGIRVTVANGQELHCTALCSDFRWRMQGQEFIAEVYVLPLETYDLILGTQWLAT 478

Query: 193 CGDILLNLNKLQISFKKDGKRITLTG 116
            GDI  N N LQ+ F+ +GK   L G
Sbjct: 479 LGDISWNFNTLQMGFELNGKPYLLQG 504


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score =  112 bits (280), Expect = 4e-23
 Identities = 58/143 (40%), Positives = 83/143 (58%)
 Frame = -3

Query: 544 LQEIETNMEISVNALGGNVSQNTIRIQGLLKKRPITILIDSGSTHNFLDLESAKQGGCSV 365
           L E +  +++S+NAL  N    T+ + G  K R + +LIDSGS+HNFL  + AK+  C  
Sbjct: 362 LGEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLIDSGSSHNFLSSKVAKRVDCCW 421

Query: 364 EPTAHMLVTVANGERIVSKAVCPNLKWTMQGHHFEDEIRILPLGGCDMVLGGDWLKKCGD 185
           +    + VTVANG  +   A+C + +W MQG  F  E+ +LPL   D++LG  WL   GD
Sbjct: 422 QKARGIRVTVANGHELHCTALCSDFRWRMQGQEFIAEVYVLPLETYDLILGTQWLATLGD 481

Query: 184 ILLNLNKLQISFKKDGKRITLTG 116
           I  N N LQ+ F+ +GK   L G
Sbjct: 482 ISWNFNTLQMGFELNGKPYLLQG 504


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