BLASTX nr result

ID: Coptis24_contig00029665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029665
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524653.1| hypothetical protein RCOM_1095450 [Ricinus c...    90   2e-16
ref|NP_001236197.1| uncharacterized protein LOC100305494 [Glycin...    90   2e-16
gb|ADF28553.1| USP transcription factor [Vitis pseudoreticulata]       89   3e-16
ref|XP_002277349.1| PREDICTED: universal stress protein A-like p...    89   3e-16
gb|AFK36553.1| unknown [Lotus japonicus]                               88   6e-16

>ref|XP_002524653.1| hypothetical protein RCOM_1095450 [Ricinus communis]
           gi|223536014|gb|EEF37672.1| hypothetical protein
           RCOM_1095450 [Ricinus communis]
          Length = 152

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/59 (67%), Positives = 51/59 (86%)
 Frame = +2

Query: 98  MANTEPTRIMIAVNESSLKGYPIPSISSKNAYEWTLNKIIRNNVTGFKLYLLHVQVPEE 274
           M ++EPTRIMI VNES++KGYP PSISSK A++WTL+KI+R+N + FKL  LHVQVP+E
Sbjct: 1   MGSSEPTRIMIGVNESTIKGYPHPSISSKGAFDWTLSKIVRSNTSAFKLLFLHVQVPDE 59


>ref|NP_001236197.1| uncharacterized protein LOC100305494 [Glycine max]
           gi|255625689|gb|ACU13189.1| unknown [Glycine max]
          Length = 175

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = +2

Query: 110 EPTRIMIAVNESSLKGYPIPSISSKNAYEWTLNKIIRNNVTGFKLYLLHVQVPEE 274
           E TR+M+AVNESS+KGYP PSISSK A+EWT+NKI+RNNV+ F L  LHVQVP+E
Sbjct: 4   EVTRVMVAVNESSMKGYPHPSISSKGAFEWTINKIVRNNVSAFNLLFLHVQVPDE 58


>gb|ADF28553.1| USP transcription factor [Vitis pseudoreticulata]
          Length = 175

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = +2

Query: 107 TEPTRIMIAVNESSLKGYPIPSISSKNAYEWTLNKIIRNNVTGFKLYLLHVQVPEE 274
           +EPTRIMIAVNESS+KGYP PSISSK A+EWTL KI+R+N + FKL  LHV VP+E
Sbjct: 3   SEPTRIMIAVNESSIKGYPHPSISSKRAFEWTLQKIVRSNTSAFKLLFLHVHVPDE 58


>ref|XP_002277349.1| PREDICTED: universal stress protein A-like protein [Vitis vinifera]
           gi|296087653|emb|CBI34909.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = +2

Query: 107 TEPTRIMIAVNESSLKGYPIPSISSKNAYEWTLNKIIRNNVTGFKLYLLHVQVPEE 274
           +EPTRIMIAVNESS+KGYP PSISSK A+EWTL KI+R+N + FKL  LHV VP+E
Sbjct: 3   SEPTRIMIAVNESSIKGYPHPSISSKRAFEWTLQKIVRSNTSAFKLLFLHVHVPDE 58


>gb|AFK36553.1| unknown [Lotus japonicus]
          Length = 174

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/53 (75%), Positives = 46/53 (86%)
 Frame = +2

Query: 116 TRIMIAVNESSLKGYPIPSISSKNAYEWTLNKIIRNNVTGFKLYLLHVQVPEE 274
           TRIM+ VNESSLKGYP PSISSK A+EWT+NKI+RNNVT F L  +HVQVP+E
Sbjct: 5   TRIMLGVNESSLKGYPHPSISSKGAFEWTINKIVRNNVTAFNLLFVHVQVPDE 57


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