BLASTX nr result

ID: Coptis24_contig00029656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029656
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26

>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/172 (43%), Positives = 106/172 (61%), Gaps = 5/172 (2%)
 Frame = +3

Query: 3   RLDFPRFDGVNPRAWVRKGNQFFYIHPMEESTKVKVASLYLEGKADSWFLEYQEGREI-I 179
           R+D   F G NPR W+R+ N+FF ++       V++ASLYLEGKA+ WF  Y  G ++ +
Sbjct: 105 RMDLTTFRGDNPRGWLRRCNKFFKLNATPWQQWVEIASLYLEGKAEIWFEGYMCGLDVSL 164

Query: 180 EWTEVTEQICKRFEEVGQDNYVGNFNKLVQTNTIEEYYERFETLKAIMVSKNKEITEEYF 359
           EW E ++ IC RF    +D+ V  FNKL Q   +EEY ERFE LK++M S N  + E Y+
Sbjct: 165 EWEEFSKAICSRFGS--RDDIVEEFNKLTQEGGMEEYVERFEELKSLMHSLNPLLPESYY 222

Query: 360 VLSFLSGLKDEIRTSVQMFKPTNLHHAWYLAKMQESTLEAQFKK----TKPV 503
           + SF+SGLK++I+  +++ KP  L  A+  AK QE +     +K    TKPV
Sbjct: 223 ISSFISGLKEDIKPMLKILKPGTLMTAFDQAKWQEESNNILARKSRFTTKPV 274


>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   RLDFPRFDGVNPRAWVRKGNQFFYIHPMEESTKVKVASLYLEGKADSWFLEYQEGRE-II 179
           R++   F G +PR W+RK  ++F IH +     ++V S YLEGKAD WF     G + +I
Sbjct: 17  RMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSLI 76

Query: 180 EWTEVTEQICKRFEEVGQDNYVGNFNKLVQTNTIEEYYERFETLKAIMVSKNKEITEEYF 359
           EW E ++ +C+RF    +D+ V  FNKL+Q   +++Y ERFE L+++M   N  + E Y+
Sbjct: 77  EWEEFSQDLCRRFGS--KDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYY 134

Query: 360 VLSFLSGLKDEIRTSVQMFKPTNLHHAWYLAKMQESTLEAQFKKTK 497
           V SF+SGLKDEI+  +++ KP  +  A+  AK QE    A  KKT+
Sbjct: 135 VSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTR 180


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   RLDFPRFDGVNPRAWVRKGNQFFYIHPMEESTKVKVASLYLEGKADSWFLEYQEGRE-II 179
           R++   F G +PR W+RK  ++F IH +     ++V S YLEGKAD WF     G + +I
Sbjct: 17  RMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSLI 76

Query: 180 EWTEVTEQICKRFEEVGQDNYVGNFNKLVQTNTIEEYYERFETLKAIMVSKNKEITEEYF 359
           EW E ++ +C+RF    +D+ V  FNKL+Q   +++Y ERFE L+++M   N  + E Y+
Sbjct: 77  EWEEFSQDLCRRFGS--KDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYY 134

Query: 360 VLSFLSGLKDEIRTSVQMFKPTNLHHAWYLAKMQESTLEAQFKKTK 497
           V SF+SGLKDEI+  +++ KP  +  A+  AK QE    A  KKT+
Sbjct: 135 VSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTR 180


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
 Frame = +3

Query: 3   RLDFPRFDGVNPRAWVRKGNQFFYIHPMEESTKVKVASLYLEGKADSWFLEYQEGRE-II 179
           R+D   F G NPR W+R+  +FF ++       V++ASLYLEGKA+ WF  Y  G E ++
Sbjct: 54  RMDLTTFWGDNPRGWLRRCKKFFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEGVV 113

Query: 180 EWTEVTEQICKRFEEVGQDNYVGNFNKLVQTNTIEEYYERFETLKAIMVSKNKEITEEYF 359
           +W + +  IC RF    +   V  FNKL+Q   ++EY ERFE LK++M S N  + E Y+
Sbjct: 114 DWEKFSGAICNRFGN--RTAIVEEFNKLMQEGDVDEYVERFEELKSLMHSLNSLLPESYY 171

Query: 360 VLSFLSGLKDEIRTSVQMFKPTNLHHAWYLAKMQEST 470
           + SF+SGLK++I+  +++ KP  L  A+  AK QE +
Sbjct: 172 ISSFISGLKEDIKPMLKILKPVTLMIAFDQAKWQEES 208


>ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|222870020|gb|EEF07151.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
 Frame = +3

Query: 3   RLDFPRFDGVNPRAWVRKGNQFFYIHPMEESTKVKVASLYLEGKADSWFLEYQEGRE-II 179
           R+D   F G NPR W+R+ N+FF ++       V++ASLYLEGKA+ WF  Y  G E ++
Sbjct: 93  RMDLTTFWGDNPRGWLRRCNKFFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEGVV 152

Query: 180 EWTEVTEQICKRFEEVGQDNYVGNFNKLVQTNTIEEYYERFETLKAIMVSKNKEITEEYF 359
           +  E +  IC RF    + + V  FNKL+Q   ++EY +RFE LK++M S N  + E Y+
Sbjct: 153 DEEEFSRAICSRFGN--RTDIVEEFNKLMQEGDVDEYVKRFEELKSLMHSLNSLLPESYY 210

Query: 360 VLSFLSGLKDEIRTSVQMFKPTNLHHAWYLAKMQEST 470
           + SF+SGLK++I+  +++ KP  L  A+  AK QE +
Sbjct: 211 ISSFISGLKEDIKPMLKILKPVTLMIAFDQAKWQEES 247


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