BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029651
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291803.1| orf34 gene product (mitochondrion) [Daucus c...    97   2e-18
ref|XP_002539514.1| conserved hypothetical protein [Ricinus comm...    72   5e-11

>ref|YP_006291803.1| orf34 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081980|gb|AEY81172.1| orf34 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 148

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/75 (64%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
 Frame = +1

Query: 19  RGGGVLERTTHVLCCPNPRKGIW*GAT------VRWLTSHFEEATGVLSSNDACGLSHSH 180
           RGGG+LERTTH  CC  P +G   G          WLT+HFEEATGVLSSNDACGLSHSH
Sbjct: 25  RGGGLLERTTH--CCVAPTQGRALGEEHCFEVGKAWLTNHFEEATGVLSSNDACGLSHSH 82

Query: 181 PKWWPNSAWSGRDSN 225
           PK WP+SAW GR+ +
Sbjct: 83  PKRWPDSAWPGREES 97


>ref|XP_002539514.1| conserved hypothetical protein [Ricinus communis]
           gi|223505440|gb|EEF22868.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/59 (66%), Positives = 40/59 (67%), Gaps = 8/59 (13%)
 Frame = -2

Query: 205 RPNWATTWDGNGSAHMHHLMKALQS--------PPRSGLSTTGP*LLTKCPSLGWGNTA 53
           RPN ATTWDGNGSAHMHHLMKALQS         PR    +    LLTKCPS GWGNTA
Sbjct: 2   RPNRATTWDGNGSAHMHHLMKALQSSRLLEVACQPR--FPSLKIMLLTKCPSWGWGNTA 58