BLASTX nr result

ID: Coptis24_contig00029638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029638
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271417.1| PREDICTED: glycerol-3-phosphate dehydrogenas...   208   4e-52
emb|CAN61056.1| hypothetical protein VITISV_041140 [Vitis vinifera]   208   4e-52
ref|XP_002323799.1| predicted protein [Populus trichocarpa] gi|2...   207   9e-52
ref|XP_003618783.1| Glycerol-3-phosphate dehydrogenase [Medicago...   206   3e-51
gb|AEZ56250.1| plastid glycerol-3-phosphate dehydrogenase [Jatro...   205   4e-51

>ref|XP_002271417.1| PREDICTED: glycerol-3-phosphate dehydrogenase [NAD+] [Vitis
           vinifera] gi|296081335|emb|CBI17717.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score =  208 bits (530), Expect = 4e-52
 Identities = 104/145 (71%), Positives = 117/145 (80%)
 Frame = +3

Query: 117 MAPTLENQMTQENEPTSQXXXXXXXXXXXXGSGNWGSVASKLIASNTLKLSSFHDEVKMW 296
           MAP  E++   E    S             GSGNWGSVA+KLIASNTLKLSSFHDEV+MW
Sbjct: 1   MAPAFEDETASETN-FSDVEQLHKSKVTVVGSGNWGSVAAKLIASNTLKLSSFHDEVRMW 59

Query: 297 VFEETLPTGEKLTEVINQTNENVKYLPGIKLGKNVVADPNIEHAVKDANMLVFVTPHQFM 476
           V+EE LP+GEKL+EVINQ NENVKYLPGIKLGKNVVADP++EHAVKDA MLVFVTPHQFM
Sbjct: 60  VYEEILPSGEKLSEVINQNNENVKYLPGIKLGKNVVADPDLEHAVKDATMLVFVTPHQFM 119

Query: 477 EGICRRLVGKVKPDVKAIPLIKGME 551
           EGIC+RLVGK++ D +AI LIKGME
Sbjct: 120 EGICKRLVGKIRGDAEAISLIKGME 144


>emb|CAN61056.1| hypothetical protein VITISV_041140 [Vitis vinifera]
          Length = 398

 Score =  208 bits (530), Expect = 4e-52
 Identities = 104/145 (71%), Positives = 117/145 (80%)
 Frame = +3

Query: 117 MAPTLENQMTQENEPTSQXXXXXXXXXXXXGSGNWGSVASKLIASNTLKLSSFHDEVKMW 296
           MAP  E++   E    S             GSGNWGSVA+KLIASNTLKLSSFHDEV+MW
Sbjct: 1   MAPAFEDETASETN-FSDVEQLHKSKVTVVGSGNWGSVAAKLIASNTLKLSSFHDEVRMW 59

Query: 297 VFEETLPTGEKLTEVINQTNENVKYLPGIKLGKNVVADPNIEHAVKDANMLVFVTPHQFM 476
           V+EE LP+GEKL+EVINQ NENVKYLPGIKLGKNVVADP++EHAVKDA MLVFVTPHQFM
Sbjct: 60  VYEEILPSGEKLSEVINQNNENVKYLPGIKLGKNVVADPDLEHAVKDATMLVFVTPHQFM 119

Query: 477 EGICRRLVGKVKPDVKAIPLIKGME 551
           EGIC+RLVGK++ D +AI LIKGME
Sbjct: 120 EGICKRLVGKIRGDAEAISLIKGME 144


>ref|XP_002323799.1| predicted protein [Populus trichocarpa] gi|222866801|gb|EEF03932.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  207 bits (527), Expect = 9e-52
 Identities = 99/115 (86%), Positives = 111/115 (96%)
 Frame = +3

Query: 207 GSGNWGSVASKLIASNTLKLSSFHDEVKMWVFEETLPTGEKLTEVINQTNENVKYLPGIK 386
           GSGNWGSVA+KLIASNTLKL+SFHDEV+MWVFEETLPTG+KLTEVINQTNENVKYLPGIK
Sbjct: 31  GSGNWGSVAAKLIASNTLKLASFHDEVRMWVFEETLPTGQKLTEVINQTNENVKYLPGIK 90

Query: 387 LGKNVVADPNIEHAVKDANMLVFVTPHQFMEGICRRLVGKVKPDVKAIPLIKGME 551
           LGKNVVADP++++AV+DA MLVFVTPHQFM+GIC+RLVGK+K DV AI LIKGME
Sbjct: 91  LGKNVVADPDLDNAVRDAKMLVFVTPHQFMDGICKRLVGKLKEDVVAISLIKGME 145


>ref|XP_003618783.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
           gi|355493798|gb|AES75001.1| Glycerol-3-phosphate
           dehydrogenase [Medicago truncatula]
          Length = 683

 Score =  206 bits (523), Expect = 3e-51
 Identities = 100/149 (67%), Positives = 122/149 (81%), Gaps = 4/149 (2%)
 Frame = +3

Query: 117 MAPTLENQ----MTQENEPTSQXXXXXXXXXXXXGSGNWGSVASKLIASNTLKLSSFHDE 284
           MAP LE Q    ++Q N   +             GSGNWGSVASKLIASNT+++++FHDE
Sbjct: 1   MAPALEVQGVENVSQNNGLNNVDDVTNRSKVTVIGSGNWGSVASKLIASNTIRMNNFHDE 60

Query: 285 VKMWVFEETLPTGEKLTEVINQTNENVKYLPGIKLGKNVVADPNIEHAVKDANMLVFVTP 464
           V+MWV+EETLP+GEKLT+VINQTNENVKYLPGIKLGKNVVADP++E+AV+DANMLVFVTP
Sbjct: 61  VRMWVYEETLPSGEKLTDVINQTNENVKYLPGIKLGKNVVADPDLENAVRDANMLVFVTP 120

Query: 465 HQFMEGICRRLVGKVKPDVKAIPLIKGME 551
           HQFMEGIC+R+ GK++ D +AI L+KGME
Sbjct: 121 HQFMEGICKRIAGKIRADAEAISLVKGME 149


>gb|AEZ56250.1| plastid glycerol-3-phosphate dehydrogenase [Jatropha curcas]
          Length = 433

 Score =  205 bits (521), Expect = 4e-51
 Identities = 97/115 (84%), Positives = 111/115 (96%)
 Frame = +3

Query: 207 GSGNWGSVASKLIASNTLKLSSFHDEVKMWVFEETLPTGEKLTEVINQTNENVKYLPGIK 386
           GSGNWGSVA+KLIASNTLKL+SFHDEV+MWVFEE LP+GEKLT+VIN+TNENVKYLPGIK
Sbjct: 82  GSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTNENVKYLPGIK 141

Query: 387 LGKNVVADPNIEHAVKDANMLVFVTPHQFMEGICRRLVGKVKPDVKAIPLIKGME 551
           LGKNVVADP++++AV+DANMLVFVTPHQFMEGIC+RLVGK+K  V+AI LIKGME
Sbjct: 142 LGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISLIKGME 196


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