BLASTX nr result

ID: Coptis24_contig00029635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029635
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544011.1| PREDICTED: uncharacterized protein LOC100783...    64   1e-08
ref|XP_002302833.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002525154.1| conserved hypothetical protein [Ricinus comm...    56   4e-06
ref|XP_002532208.1| conserved hypothetical protein [Ricinus comm...    55   6e-06
ref|NP_001237277.1| uncharacterized protein LOC100305828 [Glycin...    55   8e-06

>ref|XP_003544011.1| PREDICTED: uncharacterized protein LOC100783198 [Glycine max]
          Length = 305

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -1

Query: 229 GETAMVPVNFHSASVDFQAW-DDAWYTVNLALQGEVLTVKFIGFSDAYDEKYKATDFKTP 53
           G T    V     + +F+A+ DDAWYTV + L+GE L VK+  FSD  DE ++ + F   
Sbjct: 8   GRTTTSVVAAEEYTTEFRAYNDDAWYTVRVLLEGERLIVKYQNFSDENDEAFEPSRFGDC 67

Query: 52  KDLEGFIEKFRPTSLQL 2
           +DLE F E+FRP S QL
Sbjct: 68  EDLEDFKERFRPLSRQL 84


>ref|XP_002302833.1| predicted protein [Populus trichocarpa] gi|222844559|gb|EEE82106.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = -1

Query: 169 DDAWYTVNLALQGEVLTVKFIGFSDAYDEKYKATDFKTPKDLEGFIEKFRPTSLQL 2
           DDAWY+V   L GE LT+K+  FSD  D  ++  +FKT ++LE   ++FRP S QL
Sbjct: 25  DDAWYSVCTVLDGEKLTLKYQNFSDDDDSIFEVKNFKTLEELERLEDRFRPISAQL 80


>ref|XP_002525154.1| conserved hypothetical protein [Ricinus communis]
           gi|223535613|gb|EEF37281.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 116

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = -1

Query: 169 DDAWYTVNLALQGEVLTVKFIGFSDAYDEKYKATDFKTPKDLEGFIEKFRPTSLQL 2
           D+AWY VNL   G+ LTV +  FS+ YDEKY    F   ++LE F  +FR +S+Q+
Sbjct: 8   DNAWYDVNLFCDGKELTVHYTNFSEEYDEKYDVDVFNNMEELEEFRARFRLSSVQI 63


>ref|XP_002532208.1| conserved hypothetical protein [Ricinus communis]
           gi|223528104|gb|EEF30177.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = -1

Query: 169 DDAWYTVNLALQGEVLTVKFIGFSDAYDEKYKATDFKTPKDLEGFIEKFRPTSLQL 2
           DDAWY+V   ++GE L +K+  F D +D  ++  +FK  +++E F ++FRP S QL
Sbjct: 27  DDAWYSVRTVVEGETLRIKYENFGDEHDSVFEPQNFKCAEEIEIFEKRFRPLSNQL 82


>ref|NP_001237277.1| uncharacterized protein LOC100305828 [Glycine max]
           gi|255626717|gb|ACU13703.1| unknown [Glycine max]
          Length = 200

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = -1

Query: 187 VDFQAW-DDAWYTVNLALQGEVLTVKFIGFSDAYDEKYKATDFKTPKDLEGFIEKFRPTS 11
           V+F+A  DDAWY   ++L+GE L VK+  F D YD  ++A++F   +  + F E+FR  S
Sbjct: 16  VEFRACKDDAWYATRVSLEGETLKVKYFNFPDEYDNAFRASEFGDLEKFQEFGERFRTLS 75

Query: 10  LQ 5
            Q
Sbjct: 76  KQ 77


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