BLASTX nr result
ID: Coptis24_contig00029628
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029628 (707 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo] 224 1e-56 gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica] 214 1e-53 ref|XP_002511221.1| AMP dependent CoA ligase, putative [Ricinus ... 213 3e-53 ref|XP_002315623.1| acyl:coa ligase [Populus trichocarpa] gi|222... 211 2e-52 ref|XP_003602078.1| 4-coumarate-coa ligase [Medicago truncatula]... 209 4e-52 >gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo] Length = 1055 Score = 224 bits (571), Expect = 1e-56 Identities = 123/231 (53%), Positives = 161/231 (69%), Gaps = 5/231 (2%) Frame = +3 Query: 27 YNFKSSMACTSKHD---YNFDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXX 197 + F S A S + ++ DL+SGF T+IFHSLRP + LPP + PLS QHA Sbjct: 482 FEFTSMAARNSNFNAAPHSIDLRSGFCPLTKIFHSLRPPLSLPPLSQPLSVTQHAFSLLQ 541 Query: 198 XXXXXXXXTTALIDSVSGTRVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVP 377 +T LIDS SG +S+ FL+Q +L+ +LK+ SL G VAFIL+P LQ+P Sbjct: 542 SSSPPPN-STLLIDSNSGLHLSYAIFLRQIRNLASNLKSLTSLCNGHVAFILAPTSLQIP 600 Query: 378 ILYISLLSLGVIVSPANPASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSS 557 +LY +LLSLGV++SPANP S+VSE+S Q+ L+ PVIAFA +STASK+P+LR+GTV +DS Sbjct: 601 VLYFALLSLGVVLSPANPTSSVSEISHQIQLSKPVIAFATSSTASKLPTLRFGTVIIDSP 660 Query: 558 EFKSML--VNGVDNRNEVMVNQSDTAAILYSSGTTGRVKGVELTHRNFIAL 704 F SML NG D ++ ++QSD+AAILYSSGTTGRVKGV L+HRN IA+ Sbjct: 661 HFLSMLTETNGSDGLTDIKIDQSDSAAILYSSGTTGRVKGVLLSHRNLIAV 711 Score = 209 bits (532), Expect = 4e-52 Identities = 116/221 (52%), Positives = 151/221 (68%), Gaps = 8/221 (3%) Frame = +3 Query: 69 YNFDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVS 248 ++ D +SGF S+T+I+ SLRP + LPP + PL+ A HA+ T ALIDS S Sbjct: 4 HSVDSRSGFCSQTKIYKSLRPPLSLPPLSQPLTVAGHALSVLRSSPPPPN-TAALIDSDS 62 Query: 249 GTRVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPAN 428 G VS+ FL+Q +L+ +LK +S G VAFILSP LQ+P+LY +LLSLGV+VSPAN Sbjct: 63 GVSVSYALFLRQIRNLTSNLKALYSFSNGQVAFILSPTSLQIPVLYFALLSLGVVVSPAN 122 Query: 429 PASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLVNGVDNRNE-- 602 P S+ SE++ QV L PVIAFA++STASKIP L GTV +DS EF S++ NR+E Sbjct: 123 PISSESEIAHQVSLCKPVIAFAISSTASKIPRLPLGTVLIDSPEFLSLM--NESNRSEGV 180 Query: 603 ------VMVNQSDTAAILYSSGTTGRVKGVELTHRNFIALV 707 + +NQ+D+AAILYSSGTTGRVKGV L+HRN I + Sbjct: 181 NDGIFDLKINQNDSAAILYSSGTTGRVKGVLLSHRNLITAI 221 >gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica] Length = 540 Score = 214 bits (545), Expect = 1e-53 Identities = 114/211 (54%), Positives = 152/211 (72%) Frame = +3 Query: 75 FDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVSGT 254 FD SGFSS+T+ FHSL P + LPP +S+A +++ +T LIDS +G Sbjct: 4 FDPNSGFSSQTKTFHSLTPPLPLPPETALISSATYSLSLQLTSPWPD--STXLIDSATGQ 61 Query: 255 RVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPANPA 434 R+S+++F Q +LS SL+++ L KGDVAFILS N LQ+P+LY SLLSLGVI+SP+NP+ Sbjct: 62 RLSYSQFTTQTNNLSSSLQSHLGLSKGDVAFILSLNSLQIPLLYFSLLSLGVIISPSNPS 121 Query: 435 STVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLVNGVDNRNEVMVN 614 ST SE+SRQ+ L+ PVIAFA ++T+ KIP+LR+GTV +DS EF SM + + V V+ Sbjct: 122 STESEISRQIKLSKPVIAFATSATSHKIPALRHGTVLIDSPEFVSMTTSSGRELSCVGVS 181 Query: 615 QSDTAAILYSSGTTGRVKGVELTHRNFIALV 707 Q D AAI+YSSGTTG+VKGV LTHRN A+V Sbjct: 182 QCDIAAIMYSSGTTGQVKGVMLTHRNLTAIV 212 >ref|XP_002511221.1| AMP dependent CoA ligase, putative [Ricinus communis] gi|223550336|gb|EEF51823.1| AMP dependent CoA ligase, putative [Ricinus communis] Length = 549 Score = 213 bits (542), Expect = 3e-53 Identities = 117/212 (55%), Positives = 142/212 (66%) Frame = +3 Query: 72 NFDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVSG 251 N D +GF +T+ FHSLRP LPP + PLS AQ+A+ TT LIDS + Sbjct: 7 NIDPNNGFCKETKTFHSLRPSTPLPPSDQPLSIAQYAVSLLNSTTANLTATTFLIDSNTA 66 Query: 252 TRVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPANP 431 ++F++FL + SLS SLKT+FSL DVAFIL P L VP+LY SLLSLG+ +SPANP Sbjct: 67 ESLTFSQFLNRTRSLSFSLKTHFSLSPNDVAFILCPASLHVPLLYFSLLSLGLTISPANP 126 Query: 432 ASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLVNGVDNRNEVMV 611 S+ SEV+ Q L+ P IAFA + TA KIPS GT+ +DS EF S L N + V V Sbjct: 127 LSSNSEVAHQTQLSQPKIAFATSQTAHKIPSPPSGTILIDSPEFLSFLHNS-NTATYVSV 185 Query: 612 NQSDTAAILYSSGTTGRVKGVELTHRNFIALV 707 NQSD AAILYSSGTTG+VKGV LTHRN IAL+ Sbjct: 186 NQSDPAAILYSSGTTGKVKGVSLTHRNIIALI 217 >ref|XP_002315623.1| acyl:coa ligase [Populus trichocarpa] gi|222864663|gb|EEF01794.1| acyl:coa ligase [Populus trichocarpa] Length = 552 Score = 211 bits (536), Expect = 2e-52 Identities = 112/214 (52%), Positives = 144/214 (67%), Gaps = 4/214 (1%) Frame = +3 Query: 78 DLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVSGTR 257 D KSGF SKT +HSLRP +QLPP P+SA ++AI TTAL+D+V+G R Sbjct: 10 DPKSGFCSKTNTYHSLRPHLQLPPITTPVSATEYAISLLLYSFPSPPQTTALLDAVTGRR 69 Query: 258 VSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPANPAS 437 +SF E + E+L+ SL F LKKGD AFILSPN + +PILY+SL +LGV++SP+NP S Sbjct: 70 ISFPELIHFTETLASSLLNRFRLKKGDTAFILSPNSIHIPILYLSLFTLGVVISPSNPLS 129 Query: 438 TVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLVN----GVDNRNEV 605 + E+ Q L+ PVIAF + TA KIP T+ LDS EF+S++ + V+ V Sbjct: 130 SEQEILHQTNLSKPVIAFVTSQTAHKIPYSVKKTILLDSPEFESLMTSQTQGTVNGLERV 189 Query: 606 MVNQSDTAAILYSSGTTGRVKGVELTHRNFIALV 707 V QSD AAILYSSGTTGR KGV LTHRNFI+++ Sbjct: 190 RVYQSDPAAILYSSGTTGRFKGVLLTHRNFISML 223 >ref|XP_003602078.1| 4-coumarate-coa ligase [Medicago truncatula] gi|355491126|gb|AES72329.1| 4-coumarate-coa ligase [Medicago truncatula] Length = 560 Score = 209 bits (532), Expect = 4e-52 Identities = 116/222 (52%), Positives = 150/222 (67%), Gaps = 4/222 (1%) Frame = +3 Query: 54 TSKHDYN-FDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTA 230 T H N DL +G+ S +R FHSLRP LPPP+ PLS ++A+ TTA Sbjct: 9 TQSHSNNTIDLNTGYCSLSRTFHSLRPIAPLPPPSQPLSLTEYALSLLSTTTAVSNNTTA 68 Query: 231 LIDSVSGTRVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGV 410 LID+ + +++ FL+Q +SLS L+++ +L KG VA IL P+ + VP+LY SLLSLGV Sbjct: 69 LIDATTDHHLTYPTFLRQIKSLSSFLQSHTTLSKGHVALILIPSSIHVPVLYFSLLSLGV 128 Query: 411 IVSPANPASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLVNGVD 590 ++PANP S+ SE+S V L NPVIAF+ +STA+KIP L GTV DS F S+L + +D Sbjct: 129 TIAPANPLSSPSELSHLVHLINPVIAFSTSSTATKIPKLPLGTVIFDSPSFLSVLNSTID 188 Query: 591 NRNE---VMVNQSDTAAILYSSGTTGRVKGVELTHRNFIALV 707 E V +QSDTAAIL+SSGTTGRVKGV LTHRNFIAL+ Sbjct: 189 TDTELRPVETSQSDTAAILFSSGTTGRVKGVLLTHRNFIALI 230