BLASTX nr result

ID: Coptis24_contig00029620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029620
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO45116.1| indole-3-acetic acid-amido synthetase GH3.5 [Betu...   156   2e-36
ref|XP_002517964.1| Indole-3-acetic acid-amido synthetase GH3.5,...   153   2e-35
ref|XP_002272560.1| PREDICTED: probable indole-3-acetic acid-ami...   147   9e-34
ref|XP_002319368.1| GH3 family protein [Populus trichocarpa] gi|...   145   4e-33
gb|ABK95621.1| unknown [Populus trichocarpa]                          145   4e-33

>gb|AEO45116.1| indole-3-acetic acid-amido synthetase GH3.5 [Betula platyphylla]
          Length = 590

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/87 (82%), Positives = 81/87 (93%)
 Frame = -2

Query: 344 DELLSECCREMDASFVDHGYVVSRRTNSIGPLELCIVERGTFKKILDHFVRNGAAMSQFK 165
           + +L ECC EMDA+FVDHGYVVSRRTNSIGPLELCIVERGTF+KILD+F+ NGAAMSQFK
Sbjct: 503 ERILGECCSEMDAAFVDHGYVVSRRTNSIGPLELCIVERGTFRKILDYFIANGAAMSQFK 562

Query: 164 TPRCTSNQGILKILNFCTIKRFRSTAY 84
           TPRCT+NQ IL+ILN CTIKRF+STAY
Sbjct: 563 TPRCTANQVILRILNMCTIKRFQSTAY 589


>ref|XP_002517964.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus
           communis] gi|223542946|gb|EEF44482.1| Indole-3-acetic
           acid-amido synthetase GH3.5, putative [Ricinus communis]
          Length = 600

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/85 (83%), Positives = 78/85 (91%)
 Frame = -2

Query: 338 LLSECCREMDASFVDHGYVVSRRTNSIGPLELCIVERGTFKKILDHFVRNGAAMSQFKTP 159
           +L ECCREMD SFVDHGYVVSR+ +SIGPLELCIVERGTFKKILDHF+ NGAA+SQFKTP
Sbjct: 515 VLGECCREMDESFVDHGYVVSRKAHSIGPLELCIVERGTFKKILDHFIGNGAALSQFKTP 574

Query: 158 RCTSNQGILKILNFCTIKRFRSTAY 84
           RCTSNQ +L+ILN CTIKRF STAY
Sbjct: 575 RCTSNQVLLRILNVCTIKRFHSTAY 599


>ref|XP_002272560.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5
           [Vitis vinifera] gi|297739258|emb|CBI28909.3| unnamed
           protein product [Vitis vinifera]
          Length = 592

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/87 (77%), Positives = 79/87 (90%)
 Frame = -2

Query: 344 DELLSECCREMDASFVDHGYVVSRRTNSIGPLELCIVERGTFKKILDHFVRNGAAMSQFK 165
           D++LSECC EMDA FVD GY+VSR+T+SIGPLELCIVERGTFKKILDHF+  GAA+SQFK
Sbjct: 505 DKVLSECCNEMDACFVDQGYIVSRKTHSIGPLELCIVERGTFKKILDHFIGKGAALSQFK 564

Query: 164 TPRCTSNQGILKILNFCTIKRFRSTAY 84
           TPRCT+++ +L+ILN CTIKRF STAY
Sbjct: 565 TPRCTADEVLLRILNVCTIKRFHSTAY 591


>ref|XP_002319368.1| GH3 family protein [Populus trichocarpa]
           gi|222857744|gb|EEE95291.1| GH3 family protein [Populus
           trichocarpa]
          Length = 595

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/87 (78%), Positives = 78/87 (89%)
 Frame = -2

Query: 344 DELLSECCREMDASFVDHGYVVSRRTNSIGPLELCIVERGTFKKILDHFVRNGAAMSQFK 165
           +E+L ECC++MDASFVDHGYVVSRRT SIGPLELCIV+ GTFKKIL++F+ NGAA+SQFK
Sbjct: 508 EEVLGECCKKMDASFVDHGYVVSRRTKSIGPLELCIVKTGTFKKILEYFIGNGAALSQFK 567

Query: 164 TPRCTSNQGILKILNFCTIKRFRSTAY 84
           TPRCTSN G+LKILN  TIKR  STAY
Sbjct: 568 TPRCTSNHGLLKILNGSTIKRLYSTAY 594


>gb|ABK95621.1| unknown [Populus trichocarpa]
          Length = 595

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/87 (78%), Positives = 78/87 (89%)
 Frame = -2

Query: 344 DELLSECCREMDASFVDHGYVVSRRTNSIGPLELCIVERGTFKKILDHFVRNGAAMSQFK 165
           +E+L ECC++MDASFVDHGYVVSRRT SIGPLELCIV+ GTFKKIL++F+ NGAA+SQFK
Sbjct: 508 EEVLGECCKKMDASFVDHGYVVSRRTKSIGPLELCIVKTGTFKKILEYFIGNGAALSQFK 567

Query: 164 TPRCTSNQGILKILNFCTIKRFRSTAY 84
           TPRCTSN G+LKILN  TIKR  STAY
Sbjct: 568 TPRCTSNHGLLKILNGSTIKRLYSTAY 594


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