BLASTX nr result

ID: Coptis24_contig00029590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029590
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526399.1| PREDICTED: cellulose synthase-like protein G...    84   2e-14
emb|CBI23576.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_003598039.1| Cellulose synthase [Medicago truncatula] gi|...    77   1e-12
ref|XP_003598036.1| Cellulose synthase [Medicago truncatula] gi|...    77   1e-12
emb|CBI26390.3| unnamed protein product [Vitis vinifera]               76   3e-12

>ref|XP_003526399.1| PREDICTED: cellulose synthase-like protein G1-like [Glycine max]
          Length = 1093

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 SGTGFYMKRRAL-YGSPNEEDAYLSRPYMYFGPSNVFVNSLKKENESLLNDDGDTSQAVL 95
           SG+G Y+ R AL +GSPN++D YL     YFG S  ++ SLK       +    +   +L
Sbjct: 346 SGSGNYLSRSALLFGSPNQKDDYLKDAQKYFGKSTAYIESLKAIRGQKSSKKNISRDEML 405

Query: 94  EEAQFLASCSYERNTQWGAQIGFSHECLLES 2
            EAQ +ASCSYE NT WG ++GFS+  LLES
Sbjct: 406 REAQVVASCSYENNTNWGTEVGFSYGILLES 436


>emb|CBI23576.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/89 (47%), Positives = 55/89 (61%)
 Frame = -2

Query: 271 SGTGFYMKRRALYGSPNEEDAYLSRPYMYFGPSNVFVNSLKKENESLLNDDGDTSQAVLE 92
           SGT FY+KR ALYG+  E    L     YFGPSN  + SL +     + +DG  S  + +
Sbjct: 387 SGTCFYIKRAALYGNVGEVKDPLQLK-QYFGPSNGLIKSLGQSYPCKVIEDGSFSTRLQQ 445

Query: 91  EAQFLASCSYERNTQWGAQIGFSHECLLE 5
           E QFLASCSYE +T+WG +IGF +  +LE
Sbjct: 446 ETQFLASCSYEEHTKWGEEIGFLYNSVLE 474


>ref|XP_003598039.1| Cellulose synthase [Medicago truncatula]
           gi|355487087|gb|AES68290.1| Cellulose synthase [Medicago
           truncatula]
          Length = 563

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 SGTGFYMKRRAL-YGSPNEEDAYLSRPYMYFGPSNVFVNSLKKENESLLNDDGDTSQAVL 95
           SGTG Y+ R AL +GSP ++D YL     YFG S  ++ SLK            + + +L
Sbjct: 342 SGTGNYLNRSALLFGSPVQKDDYLLDAQNYFGKSTTYIESLKAIRGQQTIKKNLSKEEIL 401

Query: 94  EEAQFLASCSYERNTQWGAQIGFSHECLLES 2
            EAQ +AS SYE NT+WG +IGFS+  LLES
Sbjct: 402 REAQVVASSSYESNTKWGTEIGFSYGILLES 432


>ref|XP_003598036.1| Cellulose synthase [Medicago truncatula]
           gi|355487084|gb|AES68287.1| Cellulose synthase [Medicago
           truncatula]
          Length = 694

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 SGTGFYMKRRAL-YGSPNEEDAYLSRPYMYFGPSNVFVNSLKKENESLLNDDGDTSQAVL 95
           SGTG Y+ R AL +GSP ++D YL     YFG S  ++ SLK            + + +L
Sbjct: 342 SGTGNYLNRSALLFGSPVQKDDYLLDAQNYFGKSTTYIESLKAIRGQQTIKKNLSKEEIL 401

Query: 94  EEAQFLASCSYERNTQWGAQIGFSHECLLES 2
            EAQ +AS SYE NT+WG +IGFS+  LLES
Sbjct: 402 REAQVVASSSYESNTKWGTEIGFSYGILLES 432


>emb|CBI26390.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -2

Query: 268 GTGFYMKRRALYGSPNEEDAYLSRPYMYFGPSNVFVNSLKKENESLLNDDGDTSQAV-LE 92
           GT FY+KR A YGS  ++D  + +    FGPSN F+ SL +  +  ++ DG++   + L+
Sbjct: 165 GTCFYIKRVAFYGSFIQDDIDILKLRESFGPSNEFIRSLGQNYKPSVSKDGNSLSTIQLQ 224

Query: 91  EAQFLASCSYERNTQWGAQIGFSHECLLE 5
           E Q LASCSYE  T+WG ++GF ++ ++E
Sbjct: 225 ETQLLASCSYENQTKWGKEVGFLYQSVVE 253


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