BLASTX nr result

ID: Coptis24_contig00029589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029589
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280167.1| PREDICTED: origin recognition complex subuni...   202   4e-50
emb|CBI26946.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_004158973.1| PREDICTED: origin recognition complex subuni...   198   5e-49
ref|XP_004146481.1| PREDICTED: origin recognition complex subuni...   198   5e-49
ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|2...   198   6e-49

>ref|XP_002280167.1| PREDICTED: origin recognition complex subunit 4-like [Vitis
           vinifera]
          Length = 418

 Score =  202 bits (513), Expect = 4e-50
 Identities = 99/131 (75%), Positives = 114/131 (87%)
 Frame = -1

Query: 394 LREYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEK 215
           LRE GLAHKT++FVLDEFD FT+GKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEK
Sbjct: 134 LRECGLAHKTIIFVLDEFDFFTQGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEK 193

Query: 214 RVRSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVE 35
           RVRSRFSHRK+LFLPPSKED+QR   H+ +LP D++ P+ YAV FN K H I  DERF E
Sbjct: 194 RVRSRFSHRKVLFLPPSKEDLQRYFLHIFSLPVDTSLPNDYAVEFNMKLHHILADERFKE 253

Query: 34  ILDTLSDADSS 2
           I++TL ++DS+
Sbjct: 254 IINTLLNSDST 264


>emb|CBI26946.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  199 bits (505), Expect = 3e-49
 Identities = 100/138 (72%), Positives = 117/138 (84%), Gaps = 7/138 (5%)
 Frame = -1

Query: 394 LREYGLAHKTVVFVLDEFDLFTR-------GKQRLLYSLLDAMQSVTSQAVVIGVSCRLD 236
           LRE GLAHKT++FVLDEFD FT+       GKQRLLYSLLDAMQSVTSQAVVIGVSCRLD
Sbjct: 134 LRECGLAHKTIIFVLDEFDFFTQARLPLSHGKQRLLYSLLDAMQSVTSQAVVIGVSCRLD 193

Query: 235 ADQLLEKRVRSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSIC 56
           ADQLLEKRVRSRFSHRK+LFLPPSKED+QRL++H+ +LP D++ P+ YAV FN K H I 
Sbjct: 194 ADQLLEKRVRSRFSHRKVLFLPPSKEDLQRLLEHIFSLPVDTSLPNDYAVEFNMKLHHIL 253

Query: 55  GDERFVEILDTLSDADSS 2
            DERF EI++TL ++DS+
Sbjct: 254 ADERFKEIINTLLNSDST 271


>ref|XP_004158973.1| PREDICTED: origin recognition complex subunit 4-like [Cucumis
           sativus]
          Length = 418

 Score =  198 bits (504), Expect = 5e-49
 Identities = 94/131 (71%), Positives = 115/131 (87%)
 Frame = -1

Query: 394 LREYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEK 215
           LRE GLAHKT+VFVLDEFDLF +GKQRLLYSLLDAMQSV+SQA+VIG+SCRLDADQLLEK
Sbjct: 135 LRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAIVIGISCRLDADQLLEK 194

Query: 214 RVRSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVE 35
           RVRSRFSHRKLLFLPP KE+++RL++H+L+LP DS  PH Y + FNAK H++  +ERF +
Sbjct: 195 RVRSRFSHRKLLFLPPCKENVERLLEHILSLPIDSDLPHDYIIKFNAKLHNMLANERFKK 254

Query: 34  ILDTLSDADSS 2
           ++ T  D+DS+
Sbjct: 255 VISTYLDSDST 265


>ref|XP_004146481.1| PREDICTED: origin recognition complex subunit 4-like [Cucumis
           sativus]
          Length = 394

 Score =  198 bits (504), Expect = 5e-49
 Identities = 94/131 (71%), Positives = 115/131 (87%)
 Frame = -1

Query: 394 LREYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEK 215
           LRE GLAHKT+VFVLDEFDLF +GKQRLLYSLLDAMQSV+SQA+VIG+SCRLDADQLLEK
Sbjct: 135 LRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAIVIGISCRLDADQLLEK 194

Query: 214 RVRSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVE 35
           RVRSRFSHRKLLFLPP KE+++RL++H+L+LP DS  PH Y + FNAK H++  +ERF +
Sbjct: 195 RVRSRFSHRKLLFLPPCKENVERLLEHILSLPIDSDLPHDYIIKFNAKLHNMLANERFKK 254

Query: 34  ILDTLSDADSS 2
           ++ T  D+DS+
Sbjct: 255 VISTYLDSDST 265


>ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|222852242|gb|EEE89789.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  198 bits (503), Expect = 6e-49
 Identities = 98/131 (74%), Positives = 112/131 (85%)
 Frame = -1

Query: 394 LREYGLAHKTVVFVLDEFDLFTRGKQRLLYSLLDAMQSVTSQAVVIGVSCRLDADQLLEK 215
           LRE GLAHKTV+F LDEFDLF +GKQRLLYSLLDAMQSVTSQAVV+GVSCRLDADQLLEK
Sbjct: 133 LRECGLAHKTVIFALDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVVGVSCRLDADQLLEK 192

Query: 214 RVRSRFSHRKLLFLPPSKEDMQRLIKHVLALPEDSTFPHGYAVTFNAKFHSICGDERFVE 35
           RVRSRFSHRKLLFLPPSKED+QRL++H+L+LP DS+  H YA  FN K  SI  DERF E
Sbjct: 193 RVRSRFSHRKLLFLPPSKEDVQRLLEHILSLPMDSSLAHDYAAEFNEKLQSILADERFKE 252

Query: 34  ILDTLSDADSS 2
           I+    +++S+
Sbjct: 253 IISNYLNSNST 263


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