BLASTX nr result

ID: Coptis24_contig00029580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029580
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25975.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002311365.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   148   4e-34
ref|XP_003609843.1| Vacuolar protein sorting-associated protein ...   148   4e-34
ref|XP_003574966.1| PREDICTED: uncharacterized protein LOC100837...   147   7e-34

>emb|CBI25975.3| unnamed protein product [Vitis vinifera]
          Length = 4328

 Score =  151 bits (382), Expect = 5e-35
 Identities = 77/99 (77%), Positives = 80/99 (80%)
 Frame = +3

Query: 87  MFEAHVLHLLRKYLGEYVYGLSSEALRISVWKGDVVXXXXXXXXXXXXXXXXPVIVKAGF 266
           MFEAHVLHLLR+YLGEYV+GLS+EALRISVWKGDVV                PV VKAGF
Sbjct: 1   MFEAHVLHLLRRYLGEYVHGLSAEALRISVWKGDVVLRDLKLKAEALNLLKLPVTVKAGF 60

Query: 267 VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPAPDGSTLK 383
           VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPAP G TLK
Sbjct: 61  VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPAPHGRTLK 99


>ref|XP_002311365.1| predicted protein [Populus trichocarpa] gi|222851185|gb|EEE88732.1|
           predicted protein [Populus trichocarpa]
          Length = 4264

 Score =  149 bits (377), Expect = 2e-34
 Identities = 74/99 (74%), Positives = 79/99 (79%)
 Frame = +3

Query: 87  MFEAHVLHLLRKYLGEYVYGLSSEALRISVWKGDVVXXXXXXXXXXXXXXXXPVIVKAGF 266
           MFEAHVLHLLR+YLGEYV+GLS EALRISVWKGDVV                PV VKAGF
Sbjct: 1   MFEAHVLHLLRRYLGEYVHGLSVEALRISVWKGDVVLKDLNLKADALNSLKLPVTVKAGF 60

Query: 267 VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPAPDGSTLK 383
           VGTITLKVPWKSLGKEPV+VL+DRVF+LAHPAPD  TLK
Sbjct: 61  VGTITLKVPWKSLGKEPVVVLVDRVFILAHPAPDSRTLK 99


>ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101213129 [Cucumis sativus]
          Length = 4194

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/99 (77%), Positives = 78/99 (78%)
 Frame = +3

Query: 87  MFEAHVLHLLRKYLGEYVYGLSSEALRISVWKGDVVXXXXXXXXXXXXXXXXPVIVKAGF 266
           MFEAHVLHLLR+YLGEYV GLS EALRISVWKGDVV                PV VKAGF
Sbjct: 1   MFEAHVLHLLRRYLGEYVQGLSLEALRISVWKGDVVLKDLKLKTEALNSLRLPVTVKAGF 60

Query: 267 VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPAPDGSTLK 383
           VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPA DG TLK
Sbjct: 61  VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPALDGQTLK 99


>ref|XP_003609843.1| Vacuolar protein sorting-associated protein 13A [Medicago
           truncatula] gi|355510898|gb|AES92040.1| Vacuolar protein
           sorting-associated protein 13A [Medicago truncatula]
          Length = 122

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/99 (75%), Positives = 80/99 (80%)
 Frame = +3

Query: 87  MFEAHVLHLLRKYLGEYVYGLSSEALRISVWKGDVVXXXXXXXXXXXXXXXXPVIVKAGF 266
           MFEAHVLHLLRKYLGEYV+GLS+EALRISVWKGDVV                PV VK+GF
Sbjct: 1   MFEAHVLHLLRKYLGEYVHGLSAEALRISVWKGDVVLKDLKLKSEALNALKLPVTVKSGF 60

Query: 267 VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPAPDGSTLK 383
           VGTITLKVPWKSLGKEPVIVLIDRVFVLA+PAPD  T+K
Sbjct: 61  VGTITLKVPWKSLGKEPVIVLIDRVFVLANPAPDSRTIK 99


>ref|XP_003574966.1| PREDICTED: uncharacterized protein LOC100837501 [Brachypodium
           distachyon]
          Length = 3940

 Score =  147 bits (372), Expect = 7e-34
 Identities = 75/99 (75%), Positives = 78/99 (78%)
 Frame = +3

Query: 87  MFEAHVLHLLRKYLGEYVYGLSSEALRISVWKGDVVXXXXXXXXXXXXXXXXPVIVKAGF 266
           MFE HVL+LLRKYLGEYV GLS EALRISVWKGDVV                PV VKAGF
Sbjct: 1   MFEGHVLYLLRKYLGEYVEGLSVEALRISVWKGDVVLKDLKLKAEALNSLRLPVTVKAGF 60

Query: 267 VGTITLKVPWKSLGKEPVIVLIDRVFVLAHPAPDGSTLK 383
           +GTITLKVPWKSLGKEPVIVLIDR+FVLAHPAPDG TLK
Sbjct: 61  IGTITLKVPWKSLGKEPVIVLIDRLFVLAHPAPDGQTLK 99


Top