BLASTX nr result

ID: Coptis24_contig00029578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029578
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271737.1| PREDICTED: uncharacterized protein LOC100256...   112   5e-23
ref|XP_004151613.1| PREDICTED: uncharacterized protein LOC101204...   110   1e-22
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...   108   4e-22
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   105   6e-21
ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264...   103   2e-20

>ref|XP_002271737.1| PREDICTED: uncharacterized protein LOC100256578 [Vitis vinifera]
          Length = 463

 Score =  112 bits (279), Expect = 5e-23
 Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 32/204 (15%)
 Frame = -1

Query: 516 IKNAGWKPE-KSLIPKIKFLQDVGVPEPNNSNLSFYGFRGFTL--DNTRFKETVKDVLGR 346
           +K + W    K++   I  L+++GVP    S++SF   R  T+   + +F E VK V+  
Sbjct: 232 LKRSSWSSSGKTIAANIAVLREIGVPI---SHISFLVVRYHTICQKSDKFSENVKKVVEM 288

Query: 345 GF-----------------------------RSFGWSDDQIHLAIRNQPTCLDISEEKLR 253
           GF                             R +GWS+D+I  A R++P C+ +SE+K+ 
Sbjct: 289 GFNPLKFTFVNALQAFCQMTESTRQQKMEMYRRWGWSEDEIVSAFRSRPQCMQLSEKKVT 348

Query: 252 TGLNFFMNMQNWEPAQLAKAPNVLGLSMKKRVLPRLTVIEFLVSTCFIEKDVHVVSSLLI 73
             L+F +N   W+PA +A+AP  + L+ +KRV+PR +V++ L+    ++KD+ +   L +
Sbjct: 349 KVLDFLVNKMGWQPAVVARAPVAICLNFEKRVVPRCSVVKVLLLKGLVKKDLRLDHFLSL 408

Query: 72  SDAKFIDKFVAKYGDKVPELIKLY 1
           ++  F+DK+V KY D +P+L+ LY
Sbjct: 409 TEGNFLDKYVIKYEDDIPQLLDLY 432


>ref|XP_004151613.1| PREDICTED: uncharacterized protein LOC101204411 [Cucumis sativus]
          Length = 371

 Score =  110 bits (275), Expect = 1e-22
 Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 29/197 (14%)
 Frame = -1

Query: 504 GWKPEKSLIPKIKFLQDVGVPEPNNSNLSFYGFRGFTLDNTRFKETVKDVLGRGF----- 340
           GW    S+ P I+ L+ +GVP+ N S+      + F   + RFK+ V+ V   GF     
Sbjct: 160 GWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRL 219

Query: 339 ------------------------RSFGWSDDQIHLAIRNQPTCLDISEEKLRTGLNFFM 232
                                   R +G S+++I LA R  P C+  SE+K+   ++FF+
Sbjct: 220 QFVVAVFALRSMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFV 279

Query: 231 NMQNWEPAQLAKAPNVLGLSMKKRVLPRLTVIEFLVSTCFIEKDVHVVSSLLISDAKFID 52
           N    EP  +A+ P ++  S+KKR+LPR  V + LVS C I+K  H       S   FID
Sbjct: 280 NKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFID 339

Query: 51  KFVAKYGDKVPELIKLY 1
           KF+  + +++PEL++LY
Sbjct: 340 KFINPHKEQIPELLELY 356


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score =  108 bits (271), Expect = 4e-22
 Identities = 60/192 (31%), Positives = 104/192 (54%), Gaps = 29/192 (15%)
 Frame = -1

Query: 489 KSLIPKIKFLQDVGVPEPNNSNLSFYGFRGFTLDNTRFKETVKDVLGRGF---------- 340
           K+++P I  LQ++GVPE +   L  Y      L + RF ETVK V+  GF          
Sbjct: 197 KNIVPNITALQEIGVPESSIVFLITYYPIVVQLKHDRFGETVKKVMEMGFDPLTVVFIKA 256

Query: 339 -------------------RSFGWSDDQIHLAIRNQPTCLDISEEKLRTGLNFFMNMQNW 217
                              R +GWS+D+I L  R  P C+ +SE+K+ + ++F +N   W
Sbjct: 257 IQVFGGMSKSTWEQKMEVYRRWGWSNDEIVLLFRAFPACMSLSEKKIMSTMDFLVNKMGW 316

Query: 216 EPAQLAKAPNVLGLSMKKRVLPRLTVIEFLVSTCFIEKDVHVVSSLLISDAKFIDKFVAK 37
           +  ++ + P  LG +++KR++PR  V + L+    ++KD+ + + L  +++KF+D+FV K
Sbjct: 317 KLTEITRFPISLGFNLEKRIIPRCWVGKVLMLKGLVKKDLSLGAFLRYTESKFLDRFVIK 376

Query: 36  YGDKVPELIKLY 1
           Y + +P+L+ LY
Sbjct: 377 YQNHIPQLLNLY 388


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  105 bits (261), Expect = 6e-21
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 30/193 (15%)
 Frame = -1

Query: 489 KSLIPKIKFLQDVGVPEPNNSNLSFYGFRGFTLDNTRFKETVKDVLGRGF---------- 340
           K+LIP ++ L+ VGVP+   S L  +       ++  F E V++V   GF          
Sbjct: 199 KNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNKSTFVLA 258

Query: 339 --------------------RSFGWSDDQIHLAIRNQPTCLDISEEKLRTGLNFFMNMQN 220
                               + +GW+ D I  A R  P C+ +SE+K+  GL+FF+N   
Sbjct: 259 VHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRKHPHCMMLSEKKIMKGLDFFVNKMG 318

Query: 219 WEPAQLAKAPNVLGLSMKKRVLPRLTVIEFLVSTCFIEKDVHVVSSLLISDAKFIDKFVA 40
           W   ++   P +L LS++KR++PR  VI+ L S   I+KD+ + + LL  + +F+++FV 
Sbjct: 319 WPSKEIVHCPVILFLSLEKRIIPRCKVIQVLWSKGLIKKDISLNTVLLPVEKRFLERFVT 378

Query: 39  KYGDKVPELIKLY 1
           K+ ++VP+L+ +Y
Sbjct: 379 KFEEEVPQLLSVY 391


>ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264327 [Vitis vinifera]
          Length = 390

 Score =  103 bits (256), Expect = 2e-20
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 31/195 (15%)
 Frame = -1

Query: 492 EKSLIPKIKFLQDVGVPEPNNSNLSFYGFRGFTL--DNTRFKETVKDVLGRGF------- 340
           E+ +   I  ++++GVP    S++S    R  T+   + +F E VK V+  GF       
Sbjct: 185 ERIIATNIAVMREIGVPI---SHISVLVARYHTICQRSDKFSENVKKVVEMGFNPLKFAF 241

Query: 339 ----------------------RSFGWSDDQIHLAIRNQPTCLDISEEKLRTGLNFFMNM 226
                                 R +GWS+D+I  A RN+P C+ +SE+K+   L+F +N 
Sbjct: 242 VNALQAVCQTTESTWQQKMEMYRRWGWSEDEILSAFRNRPQCMQLSEKKVTKVLDFLVNK 301

Query: 225 QNWEPAQLAKAPNVLGLSMKKRVLPRLTVIEFLVSTCFIEKDVHVVSSLLISDAKFIDKF 46
             W PA +A+AP  + L+ +KRV PR +V++ L     I+KD+ + + L + +  F+DK+
Sbjct: 302 MGWRPAVVARAPIAICLNFEKRVAPRCSVVKVLSLKGLIKKDLKLGTFLNLPEGDFLDKY 361

Query: 45  VAKYGDKVPELIKLY 1
           V KY D++P+L+ +Y
Sbjct: 362 VIKYQDEIPQLLDVY 376


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