BLASTX nr result

ID: Coptis24_contig00029573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029573
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541577.1| PREDICTED: methyltransferase-like protein 17...   139   2e-31
ref|XP_003627974.1| RSM22-like protein [Medicago truncatula] gi|...   139   2e-31
ref|XP_002263667.1| PREDICTED: methyltransferase-like protein 17...   138   5e-31
ref|XP_002887871.1| hypothetical protein ARALYDRAFT_474886 [Arab...   135   3e-30
ref|NP_176641.2| copper ion binding / methyltransferase [Arabido...   134   8e-30

>ref|XP_003541577.1| PREDICTED: methyltransferase-like protein 17, mitochondrial-like
           [Glycine max]
          Length = 527

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/86 (76%), Positives = 74/86 (86%)
 Frame = -3

Query: 261 LWMEKRKCRKSKAPINEVSKDMVSYKKIGAFVVAPCPHDGPCPLVNTGKYCHFVQRLQRT 82
           LWME+RK RKS    NEV KD+++ +K GAFVVAPCPHDG CPLV +GKYCHFVQRL+RT
Sbjct: 270 LWMEERKYRKSSRKNNEVCKDLIT-EKAGAFVVAPCPHDGACPLVKSGKYCHFVQRLERT 328

Query: 81  SSQRSYKRSKGVPLRGFEDEKFCYVV 4
           SSQR+YKRSKG PLRGFEDEKF YVV
Sbjct: 329 SSQRAYKRSKGDPLRGFEDEKFSYVV 354


>ref|XP_003627974.1| RSM22-like protein [Medicago truncatula]
           gi|355521996|gb|AET02450.1| RSM22-like protein [Medicago
           truncatula]
          Length = 536

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/86 (76%), Positives = 74/86 (86%)
 Frame = -3

Query: 261 LWMEKRKCRKSKAPINEVSKDMVSYKKIGAFVVAPCPHDGPCPLVNTGKYCHFVQRLQRT 82
           LWME+RK RKS    NEV KD+++ +K GAFVVAPCPHDG CPLV +GKYCHFVQRL+RT
Sbjct: 273 LWMEERKHRKSSKKNNEVCKDLIT-EKAGAFVVAPCPHDGTCPLVKSGKYCHFVQRLERT 331

Query: 81  SSQRSYKRSKGVPLRGFEDEKFCYVV 4
           SSQR+YKRSKG PLRGFEDEKF YVV
Sbjct: 332 SSQRAYKRSKGEPLRGFEDEKFSYVV 357


>ref|XP_002263667.1| PREDICTED: methyltransferase-like protein 17, mitochondrial [Vitis
           vinifera] gi|297742403|emb|CBI34552.3| unnamed protein
           product [Vitis vinifera]
          Length = 585

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/85 (74%), Positives = 74/85 (87%)
 Frame = -3

Query: 261 LWMEKRKCRKSKAPINEVSKDMVSYKKIGAFVVAPCPHDGPCPLVNTGKYCHFVQRLQRT 82
           LWMEKR+ RK++   +EVSKD ++ K  GA++VAPCPHDGPCPL  TGKYCHFVQRLQRT
Sbjct: 347 LWMEKRRSRKNEDASDEVSKDKMALKG-GAYIVAPCPHDGPCPLEKTGKYCHFVQRLQRT 405

Query: 81  SSQRSYKRSKGVPLRGFEDEKFCYV 7
           +SQR+YKRSKG PLRGFEDEKFC+V
Sbjct: 406 TSQRAYKRSKGEPLRGFEDEKFCFV 430


>ref|XP_002887871.1| hypothetical protein ARALYDRAFT_474886 [Arabidopsis lyrata subsp.
           lyrata] gi|297333712|gb|EFH64130.1| hypothetical protein
           ARALYDRAFT_474886 [Arabidopsis lyrata subsp. lyrata]
          Length = 539

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/85 (74%), Positives = 71/85 (83%)
 Frame = -3

Query: 261 LWMEKRKCRKSKAPINEVSKDMVSYKKIGAFVVAPCPHDGPCPLVNTGKYCHFVQRLQRT 82
           LWMEKRK RK +  + +  KD++  K  GA +VAPCPHDG CPL NTGKYCHFVQRLQRT
Sbjct: 266 LWMEKRKLRKLEKKMKKDGKDVLDLKS-GAHIVAPCPHDGKCPLENTGKYCHFVQRLQRT 324

Query: 81  SSQRSYKRSKGVPLRGFEDEKFCYV 7
           SSQRSYKR+KGVPLRGFEDEKFC+V
Sbjct: 325 SSQRSYKRTKGVPLRGFEDEKFCFV 349


>ref|NP_176641.2| copper ion binding / methyltransferase [Arabidopsis thaliana]
           gi|26453110|dbj|BAC43631.1| unknown protein [Arabidopsis
           thaliana] gi|29028950|gb|AAO64854.1| At1g64600
           [Arabidopsis thaliana] gi|332196138|gb|AEE34259.1|
           copper ion binding / methyltransferase [Arabidopsis
           thaliana]
          Length = 537

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/85 (72%), Positives = 71/85 (83%)
 Frame = -3

Query: 261 LWMEKRKCRKSKAPINEVSKDMVSYKKIGAFVVAPCPHDGPCPLVNTGKYCHFVQRLQRT 82
           LWMEKRK RK +  + +  K+++  K  GA +VAPCPHDG CPL NTGKYCHFVQRLQRT
Sbjct: 266 LWMEKRKLRKLEKKMKKDGKEVLDLKS-GAHIVAPCPHDGKCPLENTGKYCHFVQRLQRT 324

Query: 81  SSQRSYKRSKGVPLRGFEDEKFCYV 7
           SSQRSYKR+KGVPLRGFEDEKFC+V
Sbjct: 325 SSQRSYKRTKGVPLRGFEDEKFCFV 349


Top