BLASTX nr result

ID: Coptis24_contig00029563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029563
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303866.1| AP2 domain-containing transcription factor [...    99   5e-19
ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive tran...    93   3e-17
emb|CBI36586.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive tran...    92   4e-17
emb|CAN69612.1| hypothetical protein VITISV_038859 [Vitis vinifera]    92   4e-17

>ref|XP_002303866.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222841298|gb|EEE78845.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 275

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/64 (68%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
 Frame = +1

Query: 1   KTSAADCPLTPQESDL--PRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLNSFSSEMFQC 174
           +TSA+DCPLTP ESD   PR +FP+DIQTYF+CQDS SY  GDD++FGDL+SF+S +F C
Sbjct: 212 RTSASDCPLTPPESDRDPPRRSFPDDIQTYFDCQDSSSYTDGDDIIFGDLHSFASPIFHC 271

Query: 175 ELDG 186
           ELDG
Sbjct: 272 ELDG 275


>ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060 [Vitis vinifera]
          Length = 347

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/58 (70%), Positives = 49/58 (84%)
 Frame = +1

Query: 4   TSAADCPLTPQESDLPRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLNSFSSEMFQCE 177
           T+AAD   TP ES+LPRC+FP+DIQTYFECQDSGSY +GDDV+F +LNSF   MFQC+
Sbjct: 287 TTAADHLSTPPESELPRCSFPDDIQTYFECQDSGSYEEGDDVIFSELNSFIPPMFQCD 344


>emb|CBI36586.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/58 (70%), Positives = 49/58 (84%)
 Frame = +1

Query: 4   TSAADCPLTPQESDLPRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLNSFSSEMFQCE 177
           T+AAD   TP ES+LPRC+FP+DIQTYFECQDSGSY +GDDV+F +LNSF   MFQC+
Sbjct: 263 TTAADHLSTPPESELPRCSFPDDIQTYFECQDSGSYEEGDDVIFSELNSFIPPMFQCD 320


>ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060-like [Vitis vinifera]
          Length = 361

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/62 (62%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   KTSAADCPLTPQES-DLPRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLNSFSSEMFQCE 177
           +TS ADCPLTP +  ++PR +FP+DIQTYF+CQ++ SY + DD++FGDL  FSS MFQCE
Sbjct: 299 RTSTADCPLTPPDQIEMPRSSFPDDIQTYFDCQETNSYGESDDIIFGDLKYFSSPMFQCE 358

Query: 178 LD 183
           LD
Sbjct: 359 LD 360


>emb|CAN69612.1| hypothetical protein VITISV_038859 [Vitis vinifera]
          Length = 338

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/62 (62%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   KTSAADCPLTPQES-DLPRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLNSFSSEMFQCE 177
           +TS ADCPLTP +  ++PR +FP+DIQTYF+CQ++ SY + DD++FGDL  FSS MFQCE
Sbjct: 276 RTSTADCPLTPPDQIEMPRSSFPDDIQTYFDCQETNSYGESDDIIFGDLKYFSSPMFQCE 335

Query: 178 LD 183
           LD
Sbjct: 336 LD 337


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