BLASTX nr result

ID: Coptis24_contig00029554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029554
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322180.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002462552.1| hypothetical protein SORBIDRAFT_02g027980 [S...   110   2e-22
ref|XP_002511359.1| UBX domain-containing protein 8-B, putative ...   110   2e-22
emb|CBI14988.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis ...   106   2e-21

>ref|XP_002322180.1| predicted protein [Populus trichocarpa] gi|222869176|gb|EEF06307.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/76 (63%), Positives = 67/76 (88%)
 Frame = +3

Query: 3   KILVRFPNGEKREQSFQCTDTIRSIYKYIDSQNIPGIAGYKLISSFPRKVFGFEQLGMTL 182
           +IL+RFPNGE++EQSF C+D I+S+Y+YIDS  +PG+  Y+LISSFPR+V+  +Q+G+TL
Sbjct: 326 QILIRFPNGERKEQSFSCSDKIQSVYRYIDSLGLPGVGNYRLISSFPRRVYSVDQMGITL 385

Query: 183 NDAGLHPRSSLFLELL 230
            DAGLHP+++LFLELL
Sbjct: 386 KDAGLHPKATLFLELL 401


>ref|XP_002462552.1| hypothetical protein SORBIDRAFT_02g027980 [Sorghum bicolor]
           gi|241925929|gb|EER99073.1| hypothetical protein
           SORBIDRAFT_02g027980 [Sorghum bicolor]
          Length = 407

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   KILVRFPNGEKREQSFQCTDTIRSIYKYIDSQNIPGIAGYKLISSFPRKVFGFEQLGMTL 182
           KI+VRFPNGE+R+QSF  TDTIR +Y+Y+DSQNIPGI  Y+L+ S+PRK +G +QLGMTL
Sbjct: 331 KIMVRFPNGERRQQSFHHTDTIREVYRYVDSQNIPGIGSYQLVRSYPRKTYGQQQLGMTL 390

Query: 183 NDAGLHPRSSLFLELL 230
            DAG +P  +L++E L
Sbjct: 391 GDAGFYPSVTLYIEQL 406


>ref|XP_002511359.1| UBX domain-containing protein 8-B, putative [Ricinus communis]
           gi|223550474|gb|EEF51961.1| UBX domain-containing
           protein 8-B, putative [Ricinus communis]
          Length = 392

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/75 (64%), Positives = 66/75 (88%)
 Frame = +3

Query: 3   KILVRFPNGEKREQSFQCTDTIRSIYKYIDSQNIPGIAGYKLISSFPRKVFGFEQLGMTL 182
           +IL+RFPNGE+REQSF  ++T++SIYK+IDS  +PGI  Y+LISSFPR+V+G +Q+G+TL
Sbjct: 317 QILIRFPNGERREQSFFSSNTVQSIYKFIDSLGLPGIVNYRLISSFPRRVYGVDQMGLTL 376

Query: 183 NDAGLHPRSSLFLEL 227
            D GLHP+++LFLEL
Sbjct: 377 KDDGLHPKATLFLEL 391


>emb|CBI14988.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/76 (61%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   KILVRFPNGEKREQSFQCTDTIRSIYKYIDSQNIPGIAGYKLISSFPRKVFGFEQLGMTL 182
           +IL+RFPNGE+RE SF   D ++S+Y+YIDS  + G+  Y+LISSFPR+V+  E++GMTL
Sbjct: 260 QILIRFPNGERREHSFSVMDKVQSVYRYIDSLGLSGVGNYRLISSFPRRVYSVEEMGMTL 319

Query: 183 NDAGLHPRSSLFLELL 230
            DA LHPR+SLFLELL
Sbjct: 320 KDACLHPRASLFLELL 335


>ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis vinifera]
          Length = 382

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/76 (61%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   KILVRFPNGEKREQSFQCTDTIRSIYKYIDSQNIPGIAGYKLISSFPRKVFGFEQLGMTL 182
           +IL+RFPNGE+RE SF   D ++S+Y+YIDS  + G+  Y+LISSFPR+V+  E++GMTL
Sbjct: 307 QILIRFPNGERREHSFSVMDKVQSVYRYIDSLGLSGVGNYRLISSFPRRVYSVEEMGMTL 366

Query: 183 NDAGLHPRSSLFLELL 230
            DA LHPR+SLFLELL
Sbjct: 367 KDACLHPRASLFLELL 382


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