BLASTX nr result

ID: Coptis24_contig00029544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029544
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522091.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003550489.1| PREDICTED: uncharacterized protein LOC100811...    59   3e-07
ref|XP_003610438.1| hypothetical protein MTR_4g132160 [Medicago ...    57   2e-06

>ref|XP_002522091.1| conserved hypothetical protein [Ricinus communis]
           gi|223538690|gb|EEF40291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 868

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 26/133 (19%)
 Frame = +3

Query: 3   QFLLYKPKPRIQI---------NLEDSFTSESCSDTDNT-EETQSSESPKESENASSSEV 152
           QFL YKP PRI++          LE+ F SES SD + T EETQS +S KESE +SS +V
Sbjct: 261 QFLHYKPNPRIELYLNKERDGKQLEEIFASESSSDAEVTEEETQSEDSQKESEGSSSGDV 320

Query: 153 -------------DQETLVSETEPVNTQVKLIXXXXXXXXXXXXIAPF---LLVFVIASL 284
                        ++E LVSE  P+N     +               F   L V  IA L
Sbjct: 321 VKEEEEEEEEEEEEEELLVSEPNPINASEVAVTAKRVSKPNFFTRTKFTALLFVLAIACL 380

Query: 285 FFQVTDTPLHSPS 323
           +  V+++P+  PS
Sbjct: 381 WASVSNSPVMDPS 393


>ref|XP_003550489.1| PREDICTED: uncharacterized protein LOC100811239 [Glycine max]
          Length = 673

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
 Frame = +3

Query: 3   QFLLYKPKPRIQI----NLEDSFTSESCSDTDNTEETQSSESPKESENASSSEV--DQET 164
           QFL YKPK R+++     L+DSF S S SDT+ TE++QS  S KESE+ SS E   ++E 
Sbjct: 278 QFLHYKPKSRMELCRERELDDSFISGSFSDTEVTEDSQSEVSQKESEDVSSDETVKEEEG 337

Query: 165 LVSETEPV------NTQVKLIXXXXXXXXXXXXIAPFLLVFVIASLFFQVTDTPLHSPST 326
            +SE  P          V+                  +L+  +A +   VTD+P+   + 
Sbjct: 338 EISELSPARRTLMPGESVEAKQVPKPRFTVRAKAVALILLLAVAFVSISVTDSPVIDRTV 397

Query: 327 YE 332
           +E
Sbjct: 398 FE 399


>ref|XP_003610438.1| hypothetical protein MTR_4g132160 [Medicago truncatula]
           gi|355511493|gb|AES92635.1| hypothetical protein
           MTR_4g132160 [Medicago truncatula]
          Length = 861

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
 Frame = +3

Query: 3   QFLLYKPKPRIQINLEDSFT-SESCSDTDNTEETQSSESPKE-SENASSSEV--DQETLV 170
           QFL YKPKPR++  LEDSF  S + SDTD TE TQS ES KE SE+ SS E    ++  +
Sbjct: 279 QFLHYKPKPRME--LEDSFDLSGNFSDTDVTEYTQSDESQKESSEDVSSDETVKQEDDQI 336

Query: 171 SETEPVNT 194
           SE  PV T
Sbjct: 337 SEQSPVRT 344


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