BLASTX nr result
ID: Coptis24_contig00029541
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029541 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays] 107 1e-21 ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containi... 106 2e-21 dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protei... 103 1e-20 ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group] g... 103 1e-20 gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japo... 103 1e-20 >gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays] Length = 683 Score = 107 bits (267), Expect = 1e-21 Identities = 49/88 (55%), Positives = 66/88 (75%) Frame = -3 Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87 LAEMAA L +++PDSSAPYVL++N+H GRW A +R MER GI K PG+SWIDL+ Sbjct: 590 LAEMAANALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGIHKHPGYSWIDLH 649 Query: 86 NKVNVFVASDRSHPLASEIHALTESFDQ 3 +KV+VF++ D SHPL EI ++ E F++ Sbjct: 650 DKVHVFISGDTSHPLTHEIFSVLECFNR 677 >ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like [Brachypodium distachyon] Length = 676 Score = 106 bits (265), Expect = 2e-21 Identities = 47/87 (54%), Positives = 65/87 (74%) Frame = -3 Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87 LA MAAK L +++P+SSAPYVL++N+H GRW A +R ME+ GI K PG+SWIDL+ Sbjct: 583 LAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDLH 642 Query: 86 NKVNVFVASDRSHPLASEIHALTESFD 6 +KV+VF++ D SHPL EI ++ + FD Sbjct: 643 DKVHVFISGDTSHPLTQEIFSVLKCFD 669 >dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa Japonica Group] gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa Japonica Group] Length = 908 Score = 103 bits (257), Expect = 1e-20 Identities = 47/86 (54%), Positives = 62/86 (72%) Frame = -3 Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87 LA+MAAKEL + PDSSAPYVL++N+H G+W A +R MER GI KQPG+SWIDL Sbjct: 590 LAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLE 649 Query: 86 NKVNVFVASDRSHPLASEIHALTESF 9 K++VF++ D HP A EI ++ E + Sbjct: 650 GKMHVFISGDTWHPNAQEIFSVLEDW 675 >ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group] gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group] Length = 695 Score = 103 bits (257), Expect = 1e-20 Identities = 47/86 (54%), Positives = 62/86 (72%) Frame = -3 Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87 LA+MAAKEL + PDSSAPYVL++N+H G+W A +R MER GI KQPG+SWIDL Sbjct: 554 LAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLE 613 Query: 86 NKVNVFVASDRSHPLASEIHALTESF 9 K++VF++ D HP A EI ++ E + Sbjct: 614 GKMHVFISGDTWHPNAQEIFSVLEDW 639 >gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japonica Group] Length = 769 Score = 103 bits (257), Expect = 1e-20 Identities = 47/86 (54%), Positives = 62/86 (72%) Frame = -3 Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87 LA+MAAKEL + PDSSAPYVL++N+H G+W A +R MER GI KQPG+SWIDL Sbjct: 402 LAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLE 461 Query: 86 NKVNVFVASDRSHPLASEIHALTESF 9 K++VF++ D HP A EI ++ E + Sbjct: 462 GKMHVFISGDTWHPNAQEIFSVLEDW 487