BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029541
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]        107   1e-21
ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protei...   103   1e-20
ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group] g...   103   1e-20
gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japo...   103   1e-20

>gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
          Length = 683

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/88 (55%), Positives = 66/88 (75%)
 Frame = -3

Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87
           LAEMAA  L +++PDSSAPYVL++N+H   GRW  A  +R  MER GI K PG+SWIDL+
Sbjct: 590 LAEMAANALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGIHKHPGYSWIDLH 649

Query: 86  NKVNVFVASDRSHPLASEIHALTESFDQ 3
           +KV+VF++ D SHPL  EI ++ E F++
Sbjct: 650 DKVHVFISGDTSHPLTHEIFSVLECFNR 677


>ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Brachypodium distachyon]
          Length = 676

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/87 (54%), Positives = 65/87 (74%)
 Frame = -3

Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87
           LA MAAK L +++P+SSAPYVL++N+H   GRW  A  +R  ME+ GI K PG+SWIDL+
Sbjct: 583 LAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDLH 642

Query: 86  NKVNVFVASDRSHPLASEIHALTESFD 6
           +KV+VF++ D SHPL  EI ++ + FD
Sbjct: 643 DKVHVFISGDTSHPLTQEIFSVLKCFD 669


>dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group] gi|51535558|dbj|BAD37476.1|
           pentatricopeptide (PPR) repeat-containing protein-like
           [Oryza sativa Japonica Group]
          Length = 908

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = -3

Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87
           LA+MAAKEL  + PDSSAPYVL++N+H   G+W  A  +R  MER GI KQPG+SWIDL 
Sbjct: 590 LAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLE 649

Query: 86  NKVNVFVASDRSHPLASEIHALTESF 9
            K++VF++ D  HP A EI ++ E +
Sbjct: 650 GKMHVFISGDTWHPNAQEIFSVLEDW 675


>ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
           gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa
           Japonica Group]
          Length = 695

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = -3

Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87
           LA+MAAKEL  + PDSSAPYVL++N+H   G+W  A  +R  MER GI KQPG+SWIDL 
Sbjct: 554 LAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLE 613

Query: 86  NKVNVFVASDRSHPLASEIHALTESF 9
            K++VF++ D  HP A EI ++ E +
Sbjct: 614 GKMHVFISGDTWHPNAQEIFSVLEDW 639


>gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japonica Group]
          Length = 769

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = -3

Query: 266 LAEMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWIDLN 87
           LA+MAAKEL  + PDSSAPYVL++N+H   G+W  A  +R  MER GI KQPG+SWIDL 
Sbjct: 402 LAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLE 461

Query: 86  NKVNVFVASDRSHPLASEIHALTESF 9
            K++VF++ D  HP A EI ++ E +
Sbjct: 462 GKMHVFISGDTWHPNAQEIFSVLEDW 487