BLASTX nr result

ID: Coptis24_contig00029534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029534
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...    98   6e-19
ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...    96   2e-18
ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865...    87   1e-15
ref|XP_002323426.1| hypothetical protein POPTRDRAFT_256578 [Popu...    87   1e-15

>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 14/140 (10%)
 Frame = -3

Query: 507 ELNTSCAEEPIQHNKLSGSSKPESKKARKSESMLESYKKFLP--GEDVNALFYRTTWGTK 334
           E   S  EE I+   L  S   + K  R  ES+L+S+++  P  GE+   ++  T  G +
Sbjct: 216 EKELSEEEEQIKRIILPSSRTKKVKDLRDLESILQSFEQKCPPGGENKVVIYTTTLRGIR 275

Query: 333 KQLDDYNQVRSILESHQIVIEERDIGWS------------WNEIDVPILFVKGKLIGGAD 190
           K  +D N  RSI+ESH I I ERD+                 E+ VP++FVKG+LIGGAD
Sbjct: 276 KTFEDCNTARSIIESHHIHIVERDVSMDSGFKEELRRLMGTKEVKVPLVFVKGRLIGGAD 335

Query: 189 EVIKLEKEGTLRILFDGIPK 130
           +V+KLE+EG L ILFDGIP+
Sbjct: 336 QVVKLEEEGKLEILFDGIPR 355


>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 67/148 (45%), Positives = 86/148 (58%), Gaps = 21/148 (14%)
 Frame = -3

Query: 510 PELNTS----CAEEPIQHNKLSGSSKPESKKARKS---ESMLESYKKFLPGEDVNALFYR 352
           PEL  S     +EE  Q  K+  S  P+ +K R S   ES+L+ ++K  P    NA+   
Sbjct: 201 PELLASFEKELSEEKEQIKKIV-SPIPKVQKLRNSRDCESILDLFEKKCPPGGANAVVIY 259

Query: 351 TTW--GTKKQLDDYNQVRSILESHQIVIEERDIGWS------------WNEIDVPILFVK 214
           TT   G +K  +D N VRSILESH I + ERDI                 E+ VP++FVK
Sbjct: 260 TTTLRGIRKTFEDCNHVRSILESHHIHMFERDISMDSGLKEELRGLMGTKEVKVPLVFVK 319

Query: 213 GKLIGGADEVIKLEKEGTLRILFDGIPK 130
           G+LIGGADEV+KLE+EG L ILFDGIP+
Sbjct: 320 GRLIGGADEVVKLEEEGKLDILFDGIPR 347


>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/127 (43%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
 Frame = -3

Query: 462 LSGSSKPESK--KARKSESMLESYKKFLP--GEDVNALFYRTTWGTKKQLDDYNQVRSIL 295
           +S + KP  K   + + ES+L+S+++  P  GE+   L+  T  G +K  +D N VRSI+
Sbjct: 249 ISITPKPHQKFKNSLQLESILQSFEQKCPPGGENAVVLYTTTLRGIRKTFEDCNTVRSII 308

Query: 294 ESHQIVIEERDIGWS------------WNEIDVPILFVKGKLIGGADEVIKLEKEGTLRI 151
           ESH I + ERDI                  + VP++FVKG+LIGGAD+V+KLE+EG L I
Sbjct: 309 ESHHIHMLERDISMDSGLKEELRRLMGTKVVKVPLVFVKGRLIGGADQVVKLEEEGKLGI 368

Query: 150 LFDGIPK 130
           LFDGIP+
Sbjct: 369 LFDGIPR 375


>ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449522666|ref|XP_004168347.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 397

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 17/129 (13%)
 Frame = -3

Query: 453 SSKPESKKAR---KSESMLESYKKFLP-GEDVNALFYRTTW-GTKKQLDDYNQVRSILES 289
           S  P+S+ AR   +SE+ L+ +++  P G + + + Y TT  G +K  +D N+VRSI+ES
Sbjct: 221 SETPKSRAARHFQESETALKKFEELCPPGGETSVVIYTTTLRGIRKTFEDCNKVRSIVES 280

Query: 288 HQIVIEERDIGWSWN------------EIDVPILFVKGKLIGGADEVIKLEKEGTLRILF 145
           + I + ERD+                 E+ VP +FVKG+LIGGA EV+K+E+EG L +LF
Sbjct: 281 YGIHVVERDVSMDSGFKEELRALMGSKEVKVPAVFVKGRLIGGAAEVLKMEEEGKLGVLF 340

Query: 144 DGIPKKRGA 118
           +GIP   G+
Sbjct: 341 EGIPTAAGS 349


>ref|XP_002323426.1| hypothetical protein POPTRDRAFT_256578 [Populus trichocarpa]
           gi|222868056|gb|EEF05187.1| hypothetical protein
           POPTRDRAFT_256578 [Populus trichocarpa]
          Length = 144

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 12/90 (13%)
 Frame = -3

Query: 363 LFYRTTWGTKKQLDDYNQVRSILESHQIVIEERDIGWS------------WNEIDVPILF 220
           ++  T  G +K  +D N VRSI+ESH I I ERD+                NE+ VP++F
Sbjct: 3   IYTTTLRGIRKTFEDCNTVRSIIESHHIHIVERDVSMDSGFKEELRGLMGTNEVKVPLVF 62

Query: 219 VKGKLIGGADEVIKLEKEGTLRILFDGIPK 130
           VKG+LIGGAD+V+KLE EG L ILFDGIPK
Sbjct: 63  VKGRLIGGADQVVKLEVEGKLEILFDGIPK 92


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