BLASTX nr result

ID: Coptis24_contig00029525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029525
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633474.1| PREDICTED: wall-associated receptor kinase-l...   184   6e-45
emb|CBI31617.3| unnamed protein product [Vitis vinifera]              184   6e-45
ref|XP_002282445.1| PREDICTED: wall-associated receptor kinase-l...   184   6e-45
dbj|BAF45465.1| hypothetical protein [Nicotiana tabacum]              172   3e-41
emb|CAN68735.1| hypothetical protein VITISV_037016 [Vitis vinifera]   166   2e-39

>ref|XP_003633474.1| PREDICTED: wall-associated receptor kinase-like 20 isoform 2 [Vitis
           vinifera]
          Length = 609

 Score =  184 bits (468), Expect = 6e-45
 Identities = 89/136 (65%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
 Frame = +1

Query: 136 LLFMAVAVLFHDGCTI-TMAATHCENCGSNTVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 312
           LLF A  +L    C +  MAA  C +CG+ +VPYPLSTG DCGDQ YKIRCD+GTLRFD 
Sbjct: 5   LLFTAALLL----CAVCAMAANRCPDCGNTSVPYPLSTGADCGDQEYKIRCDAGTLRFDT 60

Query: 313 VNGTSYTITTINPEIQRFVIQPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 492
           +N +SY+I++I P+IQRFVI+P SF  NTCV++D+  +G+QLN SLPFNVTSSNTI+YLN
Sbjct: 61  LN-SSYSISSITPQIQRFVIRPASFAGNTCVTTDLPNQGIQLNESLPFNVTSSNTILYLN 119

Query: 493 CSDTLLRSPLNCTSTS 540
           C+DTLLRSPLNC+S S
Sbjct: 120 CTDTLLRSPLNCSSIS 135


>emb|CBI31617.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score =  184 bits (468), Expect = 6e-45
 Identities = 89/136 (65%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
 Frame = +1

Query: 136 LLFMAVAVLFHDGCTI-TMAATHCENCGSNTVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 312
           LLF A  +L    C +  MAA  C +CG+ +VPYPLSTG DCGDQ YKIRCD+GTLRFD 
Sbjct: 5   LLFTAALLL----CAVCAMAANRCPDCGNTSVPYPLSTGADCGDQEYKIRCDAGTLRFDT 60

Query: 313 VNGTSYTITTINPEIQRFVIQPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 492
           +N +SY+I++I P+IQRFVI+P SF  NTCV++D+  +G+QLN SLPFNVTSSNTI+YLN
Sbjct: 61  LN-SSYSISSITPQIQRFVIRPASFAGNTCVTTDLPNQGIQLNESLPFNVTSSNTILYLN 119

Query: 493 CSDTLLRSPLNCTSTS 540
           C+DTLLRSPLNC+S S
Sbjct: 120 CTDTLLRSPLNCSSIS 135


>ref|XP_002282445.1| PREDICTED: wall-associated receptor kinase-like 20 isoform 1 [Vitis
           vinifera]
          Length = 629

 Score =  184 bits (468), Expect = 6e-45
 Identities = 89/136 (65%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
 Frame = +1

Query: 136 LLFMAVAVLFHDGCTI-TMAATHCENCGSNTVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 312
           LLF A  +L    C +  MAA  C +CG+ +VPYPLSTG DCGDQ YKIRCD+GTLRFD 
Sbjct: 5   LLFTAALLL----CAVCAMAANRCPDCGNTSVPYPLSTGADCGDQEYKIRCDAGTLRFDT 60

Query: 313 VNGTSYTITTINPEIQRFVIQPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 492
           +N +SY+I++I P+IQRFVI+P SF  NTCV++D+  +G+QLN SLPFNVTSSNTI+YLN
Sbjct: 61  LN-SSYSISSITPQIQRFVIRPASFAGNTCVTTDLPNQGIQLNESLPFNVTSSNTILYLN 119

Query: 493 CSDTLLRSPLNCTSTS 540
           C+DTLLRSPLNC+S S
Sbjct: 120 CTDTLLRSPLNCSSIS 135


>dbj|BAF45465.1| hypothetical protein [Nicotiana tabacum]
          Length = 630

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/134 (61%), Positives = 100/134 (74%)
 Frame = +1

Query: 139 LFMAVAVLFHDGCTITMAATHCENCGSNTVPYPLSTGPDCGDQSYKIRCDSGTLRFDAVN 318
           +F A  +L        ++A  C +CGS+ VPYPLSTGPDCGDQSYKIRC S  L FD +N
Sbjct: 8   IFTAALLLLMCAAAPALSARRCADCGSSPVPYPLSTGPDCGDQSYKIRCTSTQLLFDTLN 67

Query: 319 GTSYTITTINPEIQRFVIQPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLNCS 498
             SY IT+I+PE QR  IQP  F+ NTC++ DI T G+QLNSSLPFN+TSSNTI+YLNCS
Sbjct: 68  N-SYPITSISPETQRLTIQPSPFLPNTCITQDISTIGVQLNSSLPFNITSSNTIVYLNCS 126

Query: 499 DTLLRSPLNCTSTS 540
           +TLL SPLNC+S S
Sbjct: 127 ETLLTSPLNCSSAS 140


>emb|CAN68735.1| hypothetical protein VITISV_037016 [Vitis vinifera]
          Length = 254

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/136 (59%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
 Frame = +1

Query: 136 LLFMAVAVLFHDGCTI-TMAATHCENCGSNTVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 312
           LLF A  +L    C +  M+A  C +CG+  VPYPLSTG DCGDQ YKIRCD G L FD+
Sbjct: 5   LLFTAALLL----CAVCAMSANRCPDCGTTPVPYPLSTGADCGDQEYKIRCDEGKLIFDS 60

Query: 313 VNGTSYTITTINPEIQRFVIQPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 492
           VN +SY+I  I+PE QR VI+P SF  +TC+++D   +G+QLN+SLPFNVTSSNTIM+LN
Sbjct: 61  VN-SSYSIAFISPETQRLVIRPASFAGDTCITTDFPKQGIQLNNSLPFNVTSSNTIMFLN 119

Query: 493 CSDTLLRSPLNCTSTS 540
           C+++L RSPLNC+S S
Sbjct: 120 CTESLFRSPLNCSSIS 135


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