BLASTX nr result
ID: Coptis24_contig00029524
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029524 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002533079.1| isoamylase, putative [Ricinus communis] gi|2... 100 9e-20 ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Viti... 99 5e-19 ref|XP_003554240.1| PREDICTED: isoamylase 2, chloroplastic-like ... 98 6e-19 ref|XP_003520557.1| PREDICTED: isoamylase 2, chloroplastic-like ... 94 9e-18 gb|AAZ81836.1| isoamylase isoform 2 [Pisum sativum] 94 1e-17 >ref|XP_002533079.1| isoamylase, putative [Ricinus communis] gi|223527143|gb|EEF29318.1| isoamylase, putative [Ricinus communis] Length = 872 Score = 100 bits (250), Expect = 9e-20 Identities = 46/69 (66%), Positives = 54/69 (78%) Frame = -1 Query: 264 DLFVGFNGSDSSETVILPPPSQGLAWFRLVDTALPFPEFFSTDGEPVIEQTTGLLAYVMK 85 DLF+ FN + +E+VILPP +G+ W RLVDTALPFP FFS DGEPV+EQ GL+AY M Sbjct: 799 DLFMAFNAAGHAESVILPPVPEGMIWRRLVDTALPFPGFFSEDGEPVVEQIAGLIAYKMN 858 Query: 84 SHSCALFEA 58 SHSC LFEA Sbjct: 859 SHSCTLFEA 867 >ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Vitis vinifera] Length = 882 Score = 98.6 bits (244), Expect = 5e-19 Identities = 45/76 (59%), Positives = 57/76 (75%) Frame = -1 Query: 279 SSGGSDLFVGFNGSDSSETVILPPPSQGLAWFRLVDTALPFPEFFSTDGEPVIEQTTGLL 100 SS DLF+ FN +D S VILPPP G+ W RLVDTALPFP FF+ DGE ++++ +GL+ Sbjct: 804 SSIKGDLFIAFNTADRSVKVILPPPPTGMVWHRLVDTALPFPGFFTADGEAILKKKSGLV 863 Query: 99 AYVMKSHSCALFEAQS 52 Y M+SHSCALFEA + Sbjct: 864 TYKMESHSCALFEANT 879 >ref|XP_003554240.1| PREDICTED: isoamylase 2, chloroplastic-like [Glycine max] Length = 865 Score = 98.2 bits (243), Expect = 6e-19 Identities = 44/71 (61%), Positives = 54/71 (76%) Frame = -1 Query: 264 DLFVGFNGSDSSETVILPPPSQGLAWFRLVDTALPFPEFFSTDGEPVIEQTTGLLAYVMK 85 DLF+ FN +D ET +LP P +G++W+RLVDTALPFP FFST GE V EQT GL Y +K Sbjct: 792 DLFIAFNATDHPETAVLPLPPEGMSWYRLVDTALPFPGFFSTSGEVVPEQTEGLFTYQVK 851 Query: 84 SHSCALFEAQS 52 S+SC LFEA + Sbjct: 852 SYSCTLFEANN 862 >ref|XP_003520557.1| PREDICTED: isoamylase 2, chloroplastic-like [Glycine max] Length = 866 Score = 94.4 bits (233), Expect = 9e-18 Identities = 43/71 (60%), Positives = 51/71 (71%) Frame = -1 Query: 264 DLFVGFNGSDSSETVILPPPSQGLAWFRLVDTALPFPEFFSTDGEPVIEQTTGLLAYVMK 85 DLF+ FN + ET +LP P +G+ W+RLVDTALPFP FFS GE V EQT GL Y MK Sbjct: 793 DLFIAFNAAGHPETAVLPLPPEGMLWYRLVDTALPFPGFFSASGEVVPEQTAGLFTYRMK 852 Query: 84 SHSCALFEAQS 52 S+SC LFEA + Sbjct: 853 SYSCTLFEANN 863 >gb|AAZ81836.1| isoamylase isoform 2 [Pisum sativum] Length = 857 Score = 93.6 bits (231), Expect = 1e-17 Identities = 41/69 (59%), Positives = 53/69 (76%) Frame = -1 Query: 264 DLFVGFNGSDSSETVILPPPSQGLAWFRLVDTALPFPEFFSTDGEPVIEQTTGLLAYVMK 85 DLFV FN D ETV+LP P +G++W+R++DTALPFP FF +G+ V+EQ +GL Y MK Sbjct: 784 DLFVAFNADDCPETVVLPLPPEGMSWYRIIDTALPFPGFFLNNGDLVLEQMSGLSTYEMK 843 Query: 84 SHSCALFEA 58 S+SC LFEA Sbjct: 844 SYSCILFEA 852